| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yfbI [C]
Identifier: 86607809
GI number: 86607809
Start: 323019
End: 324797
Strand: Reverse
Name: yfbI [C]
Synonym: CYB_0310
Alternate gene names: 86607809
Gene position: 324797-323019 (Counterclockwise)
Preceding gene: 86607810
Following gene: 86607808
Centisome position: 10.66
GC content: 61.72
Gene sequence:
>1779_bases ATGCGTCCTTTCGGCAACCCCAACCGTCTGGGCAGTTCTCCTAGCCGCAGATCCCTGCCGGGATCCAGCTCCTTCGTTCA GTTTCGCCGCGACCCGCACCTAGTGCCCTTTTGGGGCCTAAGCCTACTAGTCATGGGCCTGGCAGTGCCTCTGTTTGTGC TTTCGGGGGCGGATCCCAGTTTGGCCGGCTGCGACGAGAGCTTTTATGCCCAAATGGCCCGCGAGCTGCTGCGGGGAGGG CATTGGCTGGGGCCCACTTTTTTGGGGGAGCCTTTTTTCGAGAAACCCCCTCTGCTCACCTGGAGCGTGGCCCTCAGTTT TGCCCTGTACGGGGTAAACGAGTGGGCAGCGCGGCTGCCAGGGATCCTCGCTGCTTTGCTCTCCATTCCCCTGGTGGGTT GGATTGGGTGGTTTTTTTTGCCGATGCGGGCGGCCTTTTTGGGGATGGCGGTTTTGCCCCTGTGCTACCTCTGGGTGCAG CAGGGGCGGCTGGTGGGGCAGGATGTGCCCTTGACCTTTCTGGAGCTGCTGGGGATCCTGGGGCTGGTCAACGGTATCCG CGGCCACAGGGTTTGGTTTTGGCTAACCGGAGTGGCCTTCGGGCTGGGCCTGCTGATGAAAAGTGCCATGATCCTGCTGC CGGGGGCGGCTTTGATCCCCTATCTCGTGCAGCAACGGCGCCGCTGGATGGGATCCGCCCCATTTTGGCTGGCGCTTGGG CTGGGCTTGGGGATTTTTGGCCTCTGGCTAGGTCCAGCCATGCAGGTGTATGGCCCACAGGTGCTGACCACCCTGGTGGG GAAGGTGTGGGATCTGGGGCAAGAGCCCTTCCATGCGGATGCCACCGGCTGGTACTACTTTTGGCACATTCCCGTTCATG GCTTCCCGTGGACGGTTTTGGCTTTGGTGGGTGGCTTTCTCCTGGTGCGCCAGCAGCCGGGATCCACGCTGCTAATCTGG TCTTTCCCCCTGCTGCTGCTGTTGTTGTTGCAGCTTTATCCCACCAAAACCCCCTACTACACCGTGCAGCTTTACCCTTG GCTGGCTCTCTTGGCCGGGGTAGCCTTGGATCAAGCGTTGGCTATGCGGGGTCGCGTCAGCGGTGCGGATCGCGTTAGCG GGACGGAGTCCTTGCACTTAAAGCCCCGTCTGGCTCAGGTGATCTCTTGGGGCCTGGCAGCGGTGGGGCTGCTGCTGTTG GGTTTGGGGGTGGCCGTCCGGCTGGGCGTAGACGGTCTGGAGCTTCTGCAATCCCACGCTTGGCCGCTGGTGGCGATGGG TCTTTTGTACCTCTTGCTGCCGGGGATCTGGAGTTGGTGGCGGGTGTTGCGCTGCGCCGGCGAGCTGTGGGTGGGAATCC TCTTGTTGGCCGGGATCCTCGCCATGATCACCATCGTCTTGCGGCCTGATTTCGGCAACTTCAGCCCTGCTTTTGCCCAA ATGGATTGGAACCAAATGCTGCCCCCGTCCGTTCGCGCTATTCGGACGGAGTCCTCGACAGAGTCTGGGGAGACGGTGGT GGATATTGGCCGCAGCGGCTTGCCGGATGTCTGTCAGGCCCAGGCCATCGCTTTTTATACCCCTAATCCGGGGAGATGGG TGGATGATCAGGCTCTGCGACGAGGGGAGCATGGAGACTACCTTTGGGTATCTCCGGTGCAGGCAGAACAGGTGGAGATC CGGGATTTGGGGTTACAACCTCTGGCGGAGGTGGAGGGCTGGCAACTGGTGCGCCGTTTGGATCCCCTCTTGGAGCAGGG CAGCGGGGAGCCTCTTTGA
Upstream 100 bases:
>100_bases AAAATTCTGCCGCTCGCGTAAGCGGGACGGAGTCCTTGTCTAGTCTGGTTAGAGCCGCCCCTTGCTGACTTGTCCCATCG CGTTAGCGGGACGGAGTCCC
Downstream 100 bases:
>100_bases GTTTAAAAATCTTAAGTTTAAGAATCCTAGGAAGTGTTAAAGCATGGCGGGAATAGCGGAATCGGGCCGGTCGTGGGTGT CTCTAGAGCGTACCTGGGTA
Product: dolichyl-phosphate-mannose-protein mannosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGG HWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLPGILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQ QGRLVGQDVPLTFLELLGILGLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVLALVGGFLLVRQQPGSTLLIW SFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQALAMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLL GLGVAVRLGVDGLELLQSHAWPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALRRGEHGDYLWVSPVQAEQVEI RDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL
Sequences:
>Translated_592_residues MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGG HWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLPGILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQ QGRLVGQDVPLTFLELLGILGLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVLALVGGFLLVRQQPGSTLLIW SFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQALAMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLL GLGVAVRLGVDGLELLQSHAWPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALRRGEHGDYLWVSPVQAEQVEI RDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL >Mature_592_residues MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPSLAGCDESFYAQMARELLRGG HWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLPGILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQ QGRLVGQDVPLTFLELLGILGLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVLALVGGFLLVRQQPGSTLLIW SFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQALAMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLL GLGVAVRLGVDGLELLQSHAWPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALRRGEHGDYLWVSPVQAEQVEI RDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=317, Percent_Identity=25.5520504731861, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 65265; Mature: 65265
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPS CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC LAGCDESFYAQMARELLRGGHWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLP CCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQQGRLVGQDVPLTFLELLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH GLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHH ALVGGFLLVRQQPGSTLLIWSFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQAL HHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH AMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLLGLGVAVRLGVDGLELLQSHA HHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC WPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALR CCHHHCCCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCEEEEECCCCCCCCCHHHHH RGEHGDYLWVSPVQAEQVEIRDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL CCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRPFGNPNRLGSSPSRRSLPGSSSFVQFRRDPHLVPFWGLSLLVMGLAVPLFVLSGADPS CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC LAGCDESFYAQMARELLRGGHWLGPTFLGEPFFEKPPLLTWSVALSFALYGVNEWAARLP CCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GILAALLSIPLVGWIGWFFLPMRAAFLGMAVLPLCYLWVQQGRLVGQDVPLTFLELLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH GLVNGIRGHRVWFWLTGVAFGLGLLMKSAMILLPGAALIPYLVQQRRRWMGSAPFWLALG HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH LGLGIFGLWLGPAMQVYGPQVLTTLVGKVWDLGQEPFHADATGWYYFWHIPVHGFPWTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHH ALVGGFLLVRQQPGSTLLIWSFPLLLLLLLQLYPTKTPYYTVQLYPWLALLAGVALDQAL HHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH AMRGRVSGADRVSGTESLHLKPRLAQVISWGLAAVGLLLLGLGVAVRLGVDGLELLQSHA HHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC WPLVAMGLLYLLLPGIWSWWRVLRCAGELWVGILLLAGILAMITIVLRPDFGNFSPAFAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH MDWNQMLPPSVRAIRTESSTESGETVVDIGRSGLPDVCQAQAIAFYTPNPGRWVDDQALR CCHHHCCCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCEEEEECCCCCCCCCHHHHH RGEHGDYLWVSPVQAEQVEIRDLGLQPLAEVEGWQLVRRLDPLLEQGSGEPL CCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]