| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607774
Identifier: 86607774
GI number: 86607774
Start: 290738
End: 291265
Strand: Direct
Name: 86607774
Synonym: CYB_0275
Alternate gene names: NA
Gene position: 290738-291265 (Clockwise)
Preceding gene: 86607773
Following gene: 86607775
Centisome position: 9.54
GC content: 56.25
Gene sequence:
>528_bases ATGACTCTGGAGACGTTTTTTACCCAGCTCAACGCCAATGGCTTAGCCATTGCGCTTTTGCTCTTTGCCACCCCTTGGGT GGTTTGGGTTCTCTGCGACTGGATCCCAGGCCAATGGGAGGAGCCTTTTTTGCTCAGCTTAAGTATCGGCTTGGGAGCGG TAACTCTTGTCCTCTGGGCGGGCTACTTGGCCTATGCCACCAACACCGCCGGCTGGCAGGCGGTGGTGAAGCAGGCGGAT ATGTTCTTGCTGCTGGTGCCTCCCTGGACTTTTCTTAGCTCCATCTGGGTGGCGCGGCAGCGCATGCCTCTCTCGCGGGT GCCGGCTTTTCGCACCTTGCAAGGGATCGGCATTTTGGCGGCAGTCTATCTTATTTTTTCTTGGCTCAGTCGCCGGGTTT ATCTTGTCTTTTTTTCCTACATGCCCTTTTCGGCTTTCTTGTGGATCCTGGCAGGGCTGTTGGGGGTGGCGTACATCGGC TATCGCATCATCTTCGGGGATCCGCCCAAGTACCCGCCTGAAACCTGA
Upstream 100 bases:
>100_bases CGGGCATTGCCCACAATAGGTGGATTTGTATACGGATTGAGTTGCTTCCTCAAGGAGGAATCATTACCATCAAGGGTGAC GTCCGCTCCTTTTGTTGTTC
Downstream 100 bases:
>100_bases GGGGACGGACAGCAGGGACTAAAATCAAGGGAGACCTTTTGCAACTTGGCAATGGTGACCGTCCCTCTGACTTCAGCCCT GAATATCGACTATCGTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTLETFFTQLNANGLAIALLLFATPWVVWVLCDWIPGQWEEPFLLSLSIGLGAVTLVLWAGYLAYATNTAGWQAVVKQAD MFLLLVPPWTFLSSIWVARQRMPLSRVPAFRTLQGIGILAAVYLIFSWLSRRVYLVFFSYMPFSAFLWILAGLLGVAYIG YRIIFGDPPKYPPET
Sequences:
>Translated_175_residues MTLETFFTQLNANGLAIALLLFATPWVVWVLCDWIPGQWEEPFLLSLSIGLGAVTLVLWAGYLAYATNTAGWQAVVKQAD MFLLLVPPWTFLSSIWVARQRMPLSRVPAFRTLQGIGILAAVYLIFSWLSRRVYLVFFSYMPFSAFLWILAGLLGVAYIG YRIIFGDPPKYPPET >Mature_174_residues TLETFFTQLNANGLAIALLLFATPWVVWVLCDWIPGQWEEPFLLSLSIGLGAVTLVLWAGYLAYATNTAGWQAVVKQADM FLLLVPPWTFLSSIWVARQRMPLSRVPAFRTLQGIGILAAVYLIFSWLSRRVYLVFFSYMPFSAFLWILAGLLGVAYIGY RIIFGDPPKYPPET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19775; Mature: 19643
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETFFTQLNANGLAIALLLFATPWVVWVLCDWIPGQWEEPFLLSLSIGLGAVTLVLWA CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHH GYLAYATNTAGWQAVVKQADMFLLLVPPWTFLSSIWVARQRMPLSRVPAFRTLQGIGILA HHHHHHCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH AVYLIFSWLSRRVYLVFFSYMPFSAFLWILAGLLGVAYIGYRIIFGDPPKYPPET HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC >Mature Secondary Structure TLETFFTQLNANGLAIALLLFATPWVVWVLCDWIPGQWEEPFLLSLSIGLGAVTLVLWA CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHH GYLAYATNTAGWQAVVKQADMFLLLVPPWTFLSSIWVARQRMPLSRVPAFRTLQGIGILA HHHHHHCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH AVYLIFSWLSRRVYLVFFSYMPFSAFLWILAGLLGVAYIGYRIIFGDPPKYPPET HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA