| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607770
Identifier: 86607770
GI number: 86607770
Start: 286566
End: 287237
Strand: Reverse
Name: 86607770
Synonym: CYB_0271
Alternate gene names: NA
Gene position: 287237-286566 (Counterclockwise)
Preceding gene: 86607771
Following gene: 86607769
Centisome position: 9.43
GC content: 63.54
Gene sequence:
>672_bases ATGTCTTGGCTGTGGCAGCAAGTCCCATCGCCGCTTGGGCGGTGGCGGAAGGAAGGGATCCCCAGCTTTGCCGCTGCTGG GGGTGCACTGGCAGTTACGGGGTTTTTTTCGCCGGCTTTTGCCCACCACGCCCTGGGAGGGAAACTGCCTGCAACGGCCT GGGAGGGATTTCTCTCCGGGCTGGCTCACCCTGTCATTGGCTTGGATCACCTGGCCTTCGTCGTGGCCATCGGTCTTGTG GCGGCGGGGCAGCCCTGGCGCTACGGGATCCCTTTGGGCTTTGTGCTAGCGGGTCTGGTGGGCACTGGGATCCACCTGGC CGGCTGGGATCCCCTGGGACTGACGGAGCTGGCCATTGCCTCTTCCGTGGTTCTCTTCGGCTTGCTGCTGGTGCAACCGC GGCAGATCCCAAGTTGGCTCTTGCTAATAGGGGGATCCCTGGCGGGGCTATTCCATGGCTATGCCTACGCCGAAACCATT ATCGGCGCCCAACCCATGCCTTGGGTGGGATATCTACTGGGGTTGAGCACCGTCCAGTATGGGGTAGCTCTCCTGGCCCT TTGGGCAGCAGAACGCTGGGGGTTGCGGATCCCTGGCTTAACCCGCTGGGCCGGCTGGGCGATTACAGTGGTGGGGGCTG CCTTCCTGACCTTGGCAGTGGTGGGCGCGTAA
Upstream 100 bases:
>100_bases TGCGCCAGTTTGAGCCGGAAAATCTGCAAGGGTACAGAGAGCGCCCGTAGACTGGGAGATCGGGGTGGCTACTGAGGGCA ACTCAGGGAGGTCTGAAAGC
Downstream 100 bases:
>100_bases AAAGCGCTAATTTTGCTCCCTTGCGCTCGGGATCCCCGATCCGGTACAAGGATAGCGGTGAAGATCTGTAAAACGAGGGG AGATCCCATGGAGCGCACCT
Product: HupE/UreJ family protein
Products: NA
Alternate protein names: HupE/UreJ Protein; HupE / UreJ Protein; HupE/UreJ Family Protein; HupE / UreJ Family Protein; Hydrogenase Accessory Protein HupE / UreJ Protein; Hydrogenase Accessory Protein HupE/UreJ Protein
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSGLAHPVIGLDHLAFVVAIGLV AAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIASSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETI IGAQPMPWVGYLLGLSTVQYGVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA
Sequences:
>Translated_223_residues MSWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSGLAHPVIGLDHLAFVVAIGLV AAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIASSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETI IGAQPMPWVGYLLGLSTVQYGVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA >Mature_222_residues SWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSGLAHPVIGLDHLAFVVAIGLVA AGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIASSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETII GAQPMPWVGYLLGLSTVQYGVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA
Specific function: Unknown
COG id: COG2370
COG function: function code O; Hydrogenase/urease accessory protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23333; Mature: 23202
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSG CCCHHHHCCHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAHPVIGLDHLAFVVAIGLVAAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHH SSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETIIGAQPMPWVGYLLGLSTVQY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWLWQQVPSPLGRWRKEGIPSFAAAGGALAVTGFFSPAFAHHALGGKLPATAWEGFLSG CCHHHHCCHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAHPVIGLDHLAFVVAIGLVAAGQPWRYGIPLGFVLAGLVGTGIHLAGWDPLGLTELAIA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHH SSVVLFGLLLVQPRQIPSWLLLIGGSLAGLFHGYAYAETIIGAQPMPWVGYLLGLSTVQY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GVALLALWAAERWGLRIPGLTRWAGWAITVVGAAFLTLAVVGA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA