| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86607768
Identifier: 86607768
GI number: 86607768
Start: 284955
End: 285965
Strand: Direct
Name: 86607768
Synonym: CYB_0269
Alternate gene names: NA
Gene position: 284955-285965 (Clockwise)
Preceding gene: 86607767
Following gene: 86607772
Centisome position: 9.35
GC content: 57.76
Gene sequence:
>1011_bases TTGTTACTGGTTCTGCGACAGCACTTGAAATCATGGCCTGGGAACTTCAAGGCCTATGCCGCAGCCTGCCGGCGGGGGGA AGTCCAACCGGGCAAAATGTTCGTTTTCGAGACCGGAAACCTGACCAATCCGCGCTACATCATCAATTTCCCCACAAAAC GCCACTGGCGGGGGAAGTCGCGGATCGAGGATATAGAAGCTGGGCTGAAGTCCCTTGCCGAGGAGATCAGGCATCTTGGT CTGCGCTCAGTCGCTTTGCCACCCCTAGGCTGCGGCCTCGGGGGTCTTCATTGGCCCGATGTGCGCTCCCGCATCGAGCA GGCGCTAGCAGAACTTCCCGACGTCCACATCCTTGTCTTTGAGCCCACCGGGCCTCAGCCTTTACCGAAGAGCATGCGCC GTGGGCAGGTTCCTACCCTAACTCCGGGAAGGGCGGTGCTGGTGGGCCTCATGGAACGTTACACCAACGGCCTACTGGTT CCCTTCGTTTCCCTGCTCGAGCTGCACAAGCTGATGTACTTCCTGCAGGAAGCCGGGGAGCCGCTTCGCCTGCGATTTAC AAAGGGCGTTTATGGCCCCCACGCTGAGAACCTGCGGCATGTTCTTAAGGAAATCGAGGGTTACTACATCTCTGGGTACG GATCGGGGAGTGATCGACCAGACAAGAAGCTGGAACTGGTGCCCGGTGCTGTCGAGGAAGCCCATAGATATCTCGCTGGA CAGCCAGAGACGAGAGAACGCTTTGAGCGTGTTAGCGACCTCGTGGAGGGCTTTGAGTCGCCCTATGGTCTAGAATTGCT GGCTACTGTCCACTGGATCGTGACTCGTGGGCACCCTTCTACGACGGCAGAGTTGGTGGAAAGCTTCTACGCCTGGGGAG ATAGAAAACAACAATTCAGTAGCAAACAGATCCTGCTTGCCGCTCGAGTTTTGGCAGAGAAGGGGTGGTTCAAGGCACTT CCAACAGAGCCGCTTGCGGCCAGCCGAAGCCAGTTCGAAACACGGCCCTAG
Upstream 100 bases:
>100_bases ATGGCGCCAATTCCAGAAAGTCCCAAAATCTACCACATTACCCATGTAGACAACTTGCAAGGGATTTTGACATACCCCCC TGCCTAAAGGCAGGGGATTC
Downstream 100 bases:
>100_bases CGCTCTGCACTACTCCCGGTCTGGAACCTGCGAACACGACTACCCCTTGCCTGCAGCAAGTACCTACTCATAAATCCAGC TTTGGGCAACCGGTGTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Appr-1-P Processing Domain Protein; Appr-1-P Processing Protein; Appr-1-P Processing; Appr-1-P Processing Family Protein; Appr-1-P Processing Family
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MLLVLRQHLKSWPGNFKAYAAACRRGEVQPGKMFVFETGNLTNPRYIINFPTKRHWRGKSRIEDIEAGLKSLAEEIRHLG LRSVALPPLGCGLGGLHWPDVRSRIEQALAELPDVHILVFEPTGPQPLPKSMRRGQVPTLTPGRAVLVGLMERYTNGLLV PFVSLLELHKLMYFLQEAGEPLRLRFTKGVYGPHAENLRHVLKEIEGYYISGYGSGSDRPDKKLELVPGAVEEAHRYLAG QPETRERFERVSDLVEGFESPYGLELLATVHWIVTRGHPSTTAELVESFYAWGDRKQQFSSKQILLAARVLAEKGWFKAL PTEPLAASRSQFETRP
Sequences:
>Translated_336_residues MLLVLRQHLKSWPGNFKAYAAACRRGEVQPGKMFVFETGNLTNPRYIINFPTKRHWRGKSRIEDIEAGLKSLAEEIRHLG LRSVALPPLGCGLGGLHWPDVRSRIEQALAELPDVHILVFEPTGPQPLPKSMRRGQVPTLTPGRAVLVGLMERYTNGLLV PFVSLLELHKLMYFLQEAGEPLRLRFTKGVYGPHAENLRHVLKEIEGYYISGYGSGSDRPDKKLELVPGAVEEAHRYLAG QPETRERFERVSDLVEGFESPYGLELLATVHWIVTRGHPSTTAELVESFYAWGDRKQQFSSKQILLAARVLAEKGWFKAL PTEPLAASRSQFETRP >Mature_336_residues MLLVLRQHLKSWPGNFKAYAAACRRGEVQPGKMFVFETGNLTNPRYIINFPTKRHWRGKSRIEDIEAGLKSLAEEIRHLG LRSVALPPLGCGLGGLHWPDVRSRIEQALAELPDVHILVFEPTGPQPLPKSMRRGQVPTLTPGRAVLVGLMERYTNGLLV PFVSLLELHKLMYFLQEAGEPLRLRFTKGVYGPHAENLRHVLKEIEGYYISGYGSGSDRPDKKLELVPGAVEEAHRYLAG QPETRERFERVSDLVEGFESPYGLELLATVHWIVTRGHPSTTAELVESFYAWGDRKQQFSSKQILLAARVLAEKGWFKAL PTEPLAASRSQFETRP
Specific function: Unknown
COG id: COG2110
COG function: function code R; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37893; Mature: 37893
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVLRQHLKSWPGNFKAYAAACRRGEVQPGKMFVFETGNLTNPRYIINFPTKRHWRGKS CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCHH RIEDIEAGLKSLAEEIRHLGLRSVALPPLGCGLGGLHWPDVRSRIEQALAELPDVHILVF HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE EPTGPQPLPKSMRRGQVPTLTPGRAVLVGLMERYTNGLLVPFVSLLELHKLMYFLQEAGE CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PLRLRFTKGVYGPHAENLRHVLKEIEGYYISGYGSGSDRPDKKLELVPGAVEEAHRYLAG CEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCC QPETRERFERVSDLVEGFESPYGLELLATVHWIVTRGHPSTTAELVESFYAWGDRKQQFS CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH SKQILLAARVLAEKGWFKALPTEPLAASRSQFETRP HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLLVLRQHLKSWPGNFKAYAAACRRGEVQPGKMFVFETGNLTNPRYIINFPTKRHWRGKS CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCHH RIEDIEAGLKSLAEEIRHLGLRSVALPPLGCGLGGLHWPDVRSRIEQALAELPDVHILVF HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE EPTGPQPLPKSMRRGQVPTLTPGRAVLVGLMERYTNGLLVPFVSLLELHKLMYFLQEAGE CCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PLRLRFTKGVYGPHAENLRHVLKEIEGYYISGYGSGSDRPDKKLELVPGAVEEAHRYLAG CEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCC QPETRERFERVSDLVEGFESPYGLELLATVHWIVTRGHPSTTAELVESFYAWGDRKQQFS CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH SKQILLAARVLAEKGWFKALPTEPLAASRSQFETRP HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA