| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cbiE/cbiT [H]
Identifier: 86607726
GI number: 86607726
Start: 236292
End: 237551
Strand: Direct
Name: cbiE/cbiT [H]
Synonym: CYB_0227
Alternate gene names: 86607726
Gene position: 236292-237551 (Clockwise)
Preceding gene: 86607725
Following gene: 86607728
Centisome position: 7.76
GC content: 63.41
Gene sequence:
>1260_bases ATGGCTACGGCAGCACCTGGGCGGTCACCTCAGCTTGCGGTCGTAGGGGTAGCGGGGGATGGCTCTGTGGCTTCCTGGGG GATCCCCCCCCTTTCCCAAGCCAGGGTTTTGGCAGGAGCCCCTCATCTGCTCCGGCACTTTACCGATCATCCGGCCCGCA AGATCCCGCTCACCGGGCCAGTGGAAAGTTGGATCCCACTTTTGCAGCAGGAGATGGCTCAGGGATCCCTAGTTTTGTTG GCCAGCGGGGATCCGCTTTTTTTCGGGATCGGGCGGCTGTTGACGGAGTATTTCCCAGCGGAGCGGTTGGCCTTCTATCC GCAGGTGAGCTCGGTGCAGCTGGCCCTGAACCGCCTGCAGATCCCCTGGCAGGAGGCGACCATCCTCAGCCTGCACGGGC GGGGAGTGGAGCGGTTGGAAGCCGTTCTCAAGCAGGGATCCCCTGTGATCGTGGTGCTCACCGATCCGGAGCATACACCG ACCGTCTTGGCCCAGTTCATTGCCGACCTGCGGCTGCCGGTGCGTTACCAAGCCTGGGTCTGTAGTCAACTGGGATCCCC TCAAGAACAGGTCGTGCCCCTCCAAGAAGGGGAAGACGCCGTTTTCCCCAGCCCCAACGTTGTGGTGCTGCGACGAGTAG AGCCGGAGCCAGATCCCCATCGCTGGCCTTTGGTCGGGATCCCGGACGACCAGTTCTACACCTTTCCCGACCAGCCCGGC TTGATCACCAAGCAGCCCATCCGCCTGCTCACCTTGGGATCCCTGCAGCTCCCCCAAGAGGGCGTGGTGTGGGATATCGG TGCCGGCACCGGCTCGGTGGCCATCGAAATAGCCCGCCTCTCTTCTCGGCTCCAGGTCTATGCTGTCGAGCGCAACGCCA TGGGCATCTGTCTGATTCGGCGCAACCGGCAACGCTTTGGCCCAGAGAACCTGCAGGTGATCCCGGGGGCAGCCCCCCAA GTGTTGGCCGACCTGCCAGATCCGGATCGGGTGGTGCTGGGCGGTGGCGGCAAAGGGATCCGCGACCTGCTGCCGGTGGT GGGAGCCCGCCTGCGGCCTGGAGGGATCTTGGTGGCCAACTTCGCTACCCTAGAAACCTGCAGTGAAGCCCTGCAATGGC TGCGTTCTCGGGGCTGGCAAGTTCGAGTAGATCACGTTCAGATCTCCCGCTCTGCCGTCCTGGCCGAGGGCACCCGCTTT GCCCCCCTGAACCCGGTTTACCTGCTGCAAGGGATCCCTTCAAATTGGAAAGCCCAGTAA
Upstream 100 bases:
>100_bases CTTTATTCGGGAGATGCGGGAAATGCAACGGGAAGTGGCGGAGCTGCGACTGGATTTTCTCAATCACATGCGCCAATACC ACCCACCTGTCGAACGTTAA
Downstream 100 bases:
>100_bases GCCCCCCGTTGCTCTGCTTTCCCTTCTCCCTGTGGGGGAGGGAAAGTTATCCCTCGTCCTCCTCATCGGCGGTGAACCCC GGTCGGTACAGGTAGGCGGA
Product: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE/T subunits
Products: NA
Alternate protein names: Precorrin-6 methyltransferase; Precorrin-6Y methylase [H]
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MATAAPGRSPQLAVVGVAGDGSVASWGIPPLSQARVLAGAPHLLRHFTDHPARKIPLTGPVESWIPLLQQEMAQGSLVLL ASGDPLFFGIGRLLTEYFPAERLAFYPQVSSVQLALNRLQIPWQEATILSLHGRGVERLEAVLKQGSPVIVVLTDPEHTP TVLAQFIADLRLPVRYQAWVCSQLGSPQEQVVPLQEGEDAVFPSPNVVVLRRVEPEPDPHRWPLVGIPDDQFYTFPDQPG LITKQPIRLLTLGSLQLPQEGVVWDIGAGTGSVAIEIARLSSRLQVYAVERNAMGICLIRRNRQRFGPENLQVIPGAAPQ VLADLPDPDRVVLGGGGKGIRDLLPVVGARLRPGGILVANFATLETCSEALQWLRSRGWQVRVDHVQISRSAVLAEGTRF APLNPVYLLQGIPSNWKAQ
Sequences:
>Translated_419_residues MATAAPGRSPQLAVVGVAGDGSVASWGIPPLSQARVLAGAPHLLRHFTDHPARKIPLTGPVESWIPLLQQEMAQGSLVLL ASGDPLFFGIGRLLTEYFPAERLAFYPQVSSVQLALNRLQIPWQEATILSLHGRGVERLEAVLKQGSPVIVVLTDPEHTP TVLAQFIADLRLPVRYQAWVCSQLGSPQEQVVPLQEGEDAVFPSPNVVVLRRVEPEPDPHRWPLVGIPDDQFYTFPDQPG LITKQPIRLLTLGSLQLPQEGVVWDIGAGTGSVAIEIARLSSRLQVYAVERNAMGICLIRRNRQRFGPENLQVIPGAAPQ VLADLPDPDRVVLGGGGKGIRDLLPVVGARLRPGGILVANFATLETCSEALQWLRSRGWQVRVDHVQISRSAVLAEGTRF APLNPVYLLQGIPSNWKAQ >Mature_418_residues ATAAPGRSPQLAVVGVAGDGSVASWGIPPLSQARVLAGAPHLLRHFTDHPARKIPLTGPVESWIPLLQQEMAQGSLVLLA SGDPLFFGIGRLLTEYFPAERLAFYPQVSSVQLALNRLQIPWQEATILSLHGRGVERLEAVLKQGSPVIVVLTDPEHTPT VLAQFIADLRLPVRYQAWVCSQLGSPQEQVVPLQEGEDAVFPSPNVVVLRRVEPEPDPHRWPLVGIPDDQFYTFPDQPGL ITKQPIRLLTLGSLQLPQEGVVWDIGAGTGSVAIEIARLSSRLQVYAVERNAMGICLIRRNRQRFGPENLQVIPGAAPQV LADLPDPDRVVLGGGGKGIRDLLPVVGARLRPGGILVANFATLETCSEALQWLRSRGWQVRVDHVQISRSAVLAEGTRFA PLNPVYLLQGIPSNWKAQ
Specific function: Catalyzes the methylation of both C-5 and C-15 in precorrin-6Y to form precorrin-8X [H]
COG id: COG2242
COG function: function code H; Precorrin-6B methylase 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012818 - InterPro: IPR014008 - InterPro: IPR006365 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.132 [H]
Molecular weight: Translated: 45561; Mature: 45430
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAAPGRSPQLAVVGVAGDGSVASWGIPPLSQARVLAGAPHLLRHFTDHPARKIPLTGP CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCC VESWIPLLQQEMAQGSLVLLASGDPLFFGIGRLLTEYFPAERLAFYPQVSSVQLALNRLQ HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHC IPWQEATILSLHGRGVERLEAVLKQGSPVIVVLTDPEHTPTVLAQFIADLRLPVRYQAWV CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH CSQLGSPQEQVVPLQEGEDAVFPSPNVVVLRRVEPEPDPHRWPLVGIPDDQFYTFPDQPG HHHCCCCHHHEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCEEECCCCCC LITKQPIRLLTLGSLQLPQEGVVWDIGAGTGSVAIEIARLSSRLQVYAVERNAMGICLIR CCCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCEEEEEEE RNRQRFGPENLQVIPGAAPQVLADLPDPDRVVLGGGGKGIRDLLPVVGARLRPGGILVAN CCHHHCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEE FATLETCSEALQWLRSRGWQVRVDHVQISRSAVLAEGTRFAPLNPVYLLQGIPSNWKAQ HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure ATAAPGRSPQLAVVGVAGDGSVASWGIPPLSQARVLAGAPHLLRHFTDHPARKIPLTGP CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCC VESWIPLLQQEMAQGSLVLLASGDPLFFGIGRLLTEYFPAERLAFYPQVSSVQLALNRLQ HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHC IPWQEATILSLHGRGVERLEAVLKQGSPVIVVLTDPEHTPTVLAQFIADLRLPVRYQAWV CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH CSQLGSPQEQVVPLQEGEDAVFPSPNVVVLRRVEPEPDPHRWPLVGIPDDQFYTFPDQPG HHHCCCCHHHEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCEEECCCCCC LITKQPIRLLTLGSLQLPQEGVVWDIGAGTGSVAIEIARLSSRLQVYAVERNAMGICLIR CCCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCEEEEEEE RNRQRFGPENLQVIPGAAPQVLADLPDPDRVVLGGGGKGIRDLLPVVGARLRPGGILVAN CCHHHCCCCCEEEECCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEE FATLETCSEALQWLRSRGWQVRVDHVQISRSAVLAEGTRFAPLNPVYLLQGIPSNWKAQ HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]