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The map label for this gene is 86607686

Identifier: 86607686

GI number: 86607686

Start: 198423

End: 199106

Strand: Direct

Name: 86607686

Synonym: CYB_0185

Alternate gene names: NA

Gene position: 198423-199106 (Clockwise)

Preceding gene: 86607680

Following gene: 86607691

Centisome position: 6.51

GC content: 62.28

Gene sequence:

>684_bases
ATGACAACAACCTCTGGGGATCCTCCGGCACTGCCCGCTTTGCTGGAGCTGTTGAACTCACAAGACTTGGGAAATCGGCT
GCGCGCCGTCAACAAGGCCAGAGAGCTGCCAGGGTCAGAAGCCTTGACGCTGTTGCAGCGAGCAATCACCGACGAGAATG
CCCGCGTCCGTTATGCTGCCATCAGCCAGATGGGCACCCTGTCTGGCGTCGATCCGAACCTACTGTTGCCCATTTTGCAG
CGCTCTTTGCGAGAGGATCCGGAGTTCGATGTGCGGGCTGCTGCCGCCGCTGCCCTGGGGGATCTCAAGCAGCCACAGGC
CCTGGCCGATCTCCTGGAAGCTTATCGGCGAGAAACGGAGTGGCTGGTACGGTTTAGCATCATCGCTGCCCTGGGAGAGC
TGGGGAACCCTGCCGCCTTCGACACTCTGGTGGAAGCTTTGCAGGACAAGAGCGAGCTGATCACCACAGCCGCTGCCGCT
GCCTTGGGCGATCTGGGGGATCCGCGGGCCATCCCCTACCTGGATCCCCTCATTGATTCCGACGACTGGCAACTGCGCTA
CCGCGTCTGCATTGCCCTGGCCAAGTTGGGAACAGAAGCCGCTCGCGCCGGACTGACCCGGCTGGCCCAGGATTCCCAAG
AACAGGTGGCCGTACATGCCCGGGCTGCCTTGGGATCCCTGTAG

Upstream 100 bases:

>100_bases
AAGGCCATAAGATCAAGGGACTGGATGCACTGCTTCAAGATAATAACATCGGCTTTTCCTCCCTCGCTATGGCCGAGGAG
GGTTATGGAGAAAATGGGAT

Downstream 100 bases:

>100_bases
ATCCCTAGCTCATGGCATTGATGATGTAGTCAAAGTAAGGGGCGGCTTCAGCGGCTGCCGCCGGCTCCAACAAGCTGAGG
GCAGCTTCCTTCAAAAAGAC

Product: phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; PBS Lyase HEAT-Like Repeat Domain Protein; HEAT Repeat-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase-Like Protein

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTTTSGDPPALPALLELLNSQDLGNRLRAVNKARELPGSEALTLLQRAITDENARVRYAAISQMGTLSGVDPNLLLPILQ
RSLREDPEFDVRAAAAAALGDLKQPQALADLLEAYRRETEWLVRFSIIAALGELGNPAAFDTLVEALQDKSELITTAAAA
ALGDLGDPRAIPYLDPLIDSDDWQLRYRVCIALAKLGTEAARAGLTRLAQDSQEQVAVHARAALGSL

Sequences:

>Translated_227_residues
MTTTSGDPPALPALLELLNSQDLGNRLRAVNKARELPGSEALTLLQRAITDENARVRYAAISQMGTLSGVDPNLLLPILQ
RSLREDPEFDVRAAAAAALGDLKQPQALADLLEAYRRETEWLVRFSIIAALGELGNPAAFDTLVEALQDKSELITTAAAA
ALGDLGDPRAIPYLDPLIDSDDWQLRYRVCIALAKLGTEAARAGLTRLAQDSQEQVAVHARAALGSL
>Mature_226_residues
TTTSGDPPALPALLELLNSQDLGNRLRAVNKARELPGSEALTLLQRAITDENARVRYAAISQMGTLSGVDPNLLLPILQR
SLREDPEFDVRAAAAAALGDLKQPQALADLLEAYRRETEWLVRFSIIAALGELGNPAAFDTLVEALQDKSELITTAAAAA
LGDLGDPRAIPYLDPLIDSDDWQLRYRVCIALAKLGTEAARAGLTRLAQDSQEQVAVHARAALGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24344; Mature: 24213

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50077 HEAT_REPEAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSGDPPALPALLELLNSQDLGNRLRAVNKARELPGSEALTLLQRAITDENARVRYAA
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHH
ISQMGTLSGVDPNLLLPILQRSLREDPEFDVRAAAAAALGDLKQPQALADLLEAYRRETE
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WLVRFSIIAALGELGNPAAFDTLVEALQDKSELITTAAAAALGDLGDPRAIPYLDPLIDS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
DDWQLRYRVCIALAKLGTEAARAGLTRLAQDSQEQVAVHARAALGSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTTSGDPPALPALLELLNSQDLGNRLRAVNKARELPGSEALTLLQRAITDENARVRYAA
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHH
ISQMGTLSGVDPNLLLPILQRSLREDPEFDVRAAAAAALGDLKQPQALADLLEAYRRETE
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WLVRFSIIAALGELGNPAAFDTLVEALQDKSELITTAAAAALGDLGDPRAIPYLDPLIDS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
DDWQLRYRVCIALAKLGTEAARAGLTRLAQDSQEQVAVHARAALGSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA