Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is dnaJ [H]

Identifier: 86607651

GI number: 86607651

Start: 165341

End: 165757

Strand: Direct

Name: dnaJ [H]

Synonym: CYB_0149

Alternate gene names: 86607651

Gene position: 165341-165757 (Clockwise)

Preceding gene: 86607650

Following gene: 86607652

Centisome position: 5.43

GC content: 59.95

Gene sequence:

>417_bases
ATGCGCTCCTTGACTTCCCTCACCTACTACCAACGGCTGGGTCTGTCTCCAGGGGCATCTCCTGAGGCCATCCGGCGGGC
TTATCGGCAGTTGAGCAAACGCTACCATCCCGATACTTCTCCCCTGGCCCCGGAAGTGGCCATTCGCTGCTTTCAAGAGT
TGCAGGAGGCCTACCTTGTCCTCAGCAACCCGACGAAACGGGCCATCTACGATGCCAGCTTACGGGCGGTGACTGCCAAC
ACGGGATCTCTGAGCATGACGGGATCCCTTGGTGCCGATTCTCTAGAGCTGCGTATGGAAACCCGCCCACTTTCGGCTGG
CGAGCTGTGTGCCCTGCTGCTGATGGGATCCACCCTGGTTGTGTGTTTGGTGTTGGCAGGTGTCCTCGCTTGGCTGCGAG
AGAGTGGGGCAAGCTGA

Upstream 100 bases:

>100_bases
AGGGATCCCGGTGTCTGCGCGAGTGATTACACTGGACTAGAGCTGTGCTCCCCTGAAAGCGGTTTTGCTGCCCCTGTAGT
CTTGCTCCTCCATAGGTTGC

Downstream 100 bases:

>100_bases
TTCTGCGAGCATTTCCTGCCCTCTTCGGTAGGACATTGGGATCGAGTTTTCGGATTCTGGATCAGGAGTGCTTGAATGAA
CATAGCCCGTTGACTCTAGG

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLVLSNPTKRAIYDASLRAVTAN
TGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLVVCLVLAGVLAWLRESGAS

Sequences:

>Translated_138_residues
MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLVLSNPTKRAIYDASLRAVTAN
TGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLVVCLVLAGVLAWLRESGAS
>Mature_138_residues
MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLVLSNPTKRAIYDASLRAVTAN
TGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLVVCLVLAGVLAWLRESGAS

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI21553335, Length=65, Percent_Identity=50.7692307692308, Blast_Score=73, Evalue=7e-14,
Organism=Homo sapiens, GI4885495, Length=65, Percent_Identity=49.2307692307692, Blast_Score=73, Evalue=9e-14,
Organism=Homo sapiens, GI17388799, Length=65, Percent_Identity=49.2307692307692, Blast_Score=71, Evalue=4e-13,
Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=48.4375, Blast_Score=70, Evalue=5e-13,
Organism=Homo sapiens, GI194328760, Length=68, Percent_Identity=45.5882352941176, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI194328758, Length=63, Percent_Identity=49.2063492063492, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI5031741, Length=71, Percent_Identity=45.0704225352113, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI5453690, Length=65, Percent_Identity=55.3846153846154, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45552813, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45549272, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45552811, Length=70, Percent_Identity=48.5714285714286, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 14934; Mature: 14934

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LSNPTKRAIYDASLRAVTANTGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLV
HCCCCHHHHHHHHHHEEECCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
VCLVLAGVLAWLRESGAS
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSLTSLTYYQRLGLSPGASPEAIRRAYRQLSKRYHPDTSPLAPEVAIRCFQELQEAYLV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LSNPTKRAIYDASLRAVTANTGSLSMTGSLGADSLELRMETRPLSAGELCALLLMGSTLV
HCCCCHHHHHHHHHHEEECCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
VCLVLAGVLAWLRESGAS
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA