| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is adcA [H]
Identifier: 86607646
GI number: 86607646
Start: 160944
End: 162065
Strand: Direct
Name: adcA [H]
Synonym: CYB_0144
Alternate gene names: 86607646
Gene position: 160944-162065 (Clockwise)
Preceding gene: 86607645
Following gene: 86607647
Centisome position: 5.28
GC content: 58.38
Gene sequence:
>1122_bases ATGACCGATAGGCTTAACTCTCTTCGCTCTGTTCGATCCATGCGATTGCTGGTATCTCTGGTGGCCGCTCTTTCGGTCGG GATCCTGGGAAGCCTGCAGATGCGCCAAGAAGAGTCCCGGGCCCAGCAGGGATCCAGCCCCCCAAAGGTGGTGACCACGA TTTTGCCGATAACGCAATTTACCCGTGCTGTGGCCGGGGATCGGGCAGAAGTCACGCCACTCCTTCCCCCTCAGATGGGG CCCCACGACTTTCAGGCTCGACCTGAGGAGGTTCGTTTGCTGGCTCAGGCGGATGTGCTGGTGATCAACGGGTTGGGTAT GGAAACGTTTTTGGAAGGGTTGATCGCCAGCGCTGGGAACCCCCAATTGCAAATCGTTGACAGCAGCGAAGGGATCCCAA CTTTGCGGGCTGAGGAGCCAGAGCATGGGCACTCCCACGGTCACGGCCATGGACACTCTCATGGACACAGTCACGGCCAT TCTCACGGGCACGGTCATGGACACTCTCATGGGCACAGCCACGGCGAGTTTAACCCTCACATTTGGCTGGATCCCAGGCG GGCCATTCAGCAGGTGGAAAATATTCGTGATGGCCTCATCTCTGTAGATCCGGCGGGGGCAGAGATCTACCAGGCCAATG CGGCTGCTTTTATCGAGAAGCTCAAGGCTTTGGATGAGGAGATTGCCGCTCGGCTAGCTCCCTTTGCCGGAAGAAGCTTT GTGGTCTTCCACGACTTTGCCCCCTATTTTGCCGAGCGCTACAACCTCAAAGCCGAGTTCTTGGTGGAGATCCCAGAGGC CAATCCTTCTCCAGAAGATGTGCGACGGGTGATGGAGACGGTGCGGGAGTCGGGCCTGAAGACGATCCTGGTGGAACCGC AGCTGGGGAGTAACAACCCCTTTGAGGTTTTGGCCAGAGACCTAGGGATCCAAGTTCGCGTTTTCGATCCCATCGAAACC GCTGGCCCTGAGGGGATCGAGCCGGAATATTACCTGACCATCCTGCGGCAAAACGTGGAGAACCTGGTCTCCGCCTTTGA GAAGGAGACGGCCTTCCTGCCCCTGCAATTGCCGCTGCTGGGCCAAGCTGCTCTCGAACACCTGCTGGCGAGGGGGCGAT GA
Upstream 100 bases:
>100_bases GTGAGCATGTTTTCTTTGCTCCAGCAGAGGGCTTTGGCTTTTCGAAGGTCGGGTTCTGCAAGTTCTGCTGTCTCTGTTGT TTTGTGAGGTATTTCTGCAC
Downstream 100 bases:
>100_bases TCTCCTGCTCCGGCGAGGTTGTCCTGCGCGTCGAGGGGCTGACGGTCTATCGGGGATCCCAGTTGGCGGTGCAAAATGTG TCGTTTGAGCTGAGGGCGGG
Product: zinc ABC transporter, periplasmic zinc-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTDRLNSLRSVRSMRLLVSLVAALSVGILGSLQMRQEESRAQQGSSPPKVVTTILPITQFTRAVAGDRAEVTPLLPPQMG PHDFQARPEEVRLLAQADVLVINGLGMETFLEGLIASAGNPQLQIVDSSEGIPTLRAEEPEHGHSHGHGHGHSHGHSHGH SHGHGHGHSHGHSHGEFNPHIWLDPRRAIQQVENIRDGLISVDPAGAEIYQANAAAFIEKLKALDEEIAARLAPFAGRSF VVFHDFAPYFAERYNLKAEFLVEIPEANPSPEDVRRVMETVRESGLKTILVEPQLGSNNPFEVLARDLGIQVRVFDPIET AGPEGIEPEYYLTILRQNVENLVSAFEKETAFLPLQLPLLGQAALEHLLARGR
Sequences:
>Translated_373_residues MTDRLNSLRSVRSMRLLVSLVAALSVGILGSLQMRQEESRAQQGSSPPKVVTTILPITQFTRAVAGDRAEVTPLLPPQMG PHDFQARPEEVRLLAQADVLVINGLGMETFLEGLIASAGNPQLQIVDSSEGIPTLRAEEPEHGHSHGHGHGHSHGHSHGH SHGHGHGHSHGHSHGEFNPHIWLDPRRAIQQVENIRDGLISVDPAGAEIYQANAAAFIEKLKALDEEIAARLAPFAGRSF VVFHDFAPYFAERYNLKAEFLVEIPEANPSPEDVRRVMETVRESGLKTILVEPQLGSNNPFEVLARDLGIQVRVFDPIET AGPEGIEPEYYLTILRQNVENLVSAFEKETAFLPLQLPLLGQAALEHLLARGR >Mature_372_residues TDRLNSLRSVRSMRLLVSLVAALSVGILGSLQMRQEESRAQQGSSPPKVVTTILPITQFTRAVAGDRAEVTPLLPPQMGP HDFQARPEEVRLLAQADVLVINGLGMETFLEGLIASAGNPQLQIVDSSEGIPTLRAEEPEHGHSHGHGHGHSHGHSHGHS HGHGHGHSHGHSHGEFNPHIWLDPRRAIQQVENIRDGLISVDPAGAEIYQANAAAFIEKLKALDEEIAARLAPFAGRSFV VFHDFAPYFAERYNLKAEFLVEIPEANPSPEDVRRVMETVRESGLKTILVEPQLGSNNPFEVLARDLGIQVRVFDPIETA GPEGIEPEYYLTILRQNVENLVSAFEKETAFLPLQLPLLGQAALEHLLARGR
Specific function: Part of the ATP-driven transport system AdcABC for zinc [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=274, Percent_Identity=26.6423357664234, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR012674 - InterPro: IPR011038 - InterPro: IPR006128 - InterPro: IPR015304 [H]
Pfam domain/function: PF01297 SBP_bac_9; PF09223 YodA [H]
EC number: NA
Molecular weight: Translated: 40910; Mature: 40779
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLNSLRSVRSMRLLVSLVAALSVGILGSLQMRQEESRAQQGSSPPKVVTTILPITQF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TRAVAGDRAEVTPLLPPQMGPHDFQARPEEVRLLAQADVLVINGLGMETFLEGLIASAGN HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCC PQLQIVDSSEGIPTLRAEEPEHGHSHGHGHGHSHGHSHGHSHGHGHGHSHGHSHGEFNPH CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IWLDPRRAIQQVENIRDGLISVDPAGAEIYQANAAAFIEKLKALDEEIAARLAPFAGRSF EEECHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VVFHDFAPYFAERYNLKAEFLVEIPEANPSPEDVRRVMETVRESGLKTILVEPQLGSNNP EEEECHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCH FEVLARDLGIQVRVFDPIETAGPEGIEPEYYLTILRQNVENLVSAFEKETAFLPLQLPLL HHHHHHHHCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHH GQAALEHLLARGR HHHHHHHHHHCCC >Mature Secondary Structure TDRLNSLRSVRSMRLLVSLVAALSVGILGSLQMRQEESRAQQGSSPPKVVTTILPITQF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TRAVAGDRAEVTPLLPPQMGPHDFQARPEEVRLLAQADVLVINGLGMETFLEGLIASAGN HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCC PQLQIVDSSEGIPTLRAEEPEHGHSHGHGHGHSHGHSHGHSHGHGHGHSHGHSHGEFNPH CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IWLDPRRAIQQVENIRDGLISVDPAGAEIYQANAAAFIEKLKALDEEIAARLAPFAGRSF EEECHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VVFHDFAPYFAERYNLKAEFLVEIPEANPSPEDVRRVMETVRESGLKTILVEPQLGSNNP EEEECHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCH FEVLARDLGIQVRVFDPIETAGPEGIEPEYYLTILRQNVENLVSAFEKETAFLPLQLPLL HHHHHHHHCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHH GQAALEHLLARGR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]