| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607613
Identifier: 86607613
GI number: 86607613
Start: 125417
End: 126004
Strand: Direct
Name: 86607613
Synonym: CYB_0111
Alternate gene names: NA
Gene position: 125417-126004 (Clockwise)
Preceding gene: 86607609
Following gene: 86607614
Centisome position: 4.12
GC content: 61.22
Gene sequence:
>588_bases ATGACTTCCCAGATTCAGCCCTGCACACGCGAACAGATCTTGAATGGAATGGGCATCACCACCCTGTTTTCGGCTCTCAT TGTGGGTCTCTGGATCTGGCTGGGATCCTCCTTTCCCGTGCCGTTTCGCTGGGATCCCCTAGCCTTGGCGTGGGGGGCAG GGCTGGGACTGGGGGTGGCTCTGCTCAGCGGCGGGGTTTACCGGCTCTGGCCAGCCTATCGTCGGGCAGCCACTGCCTAC TTACACTGGGTGGCGGATCCCTTGCAGTGGGGAGACATCCTTTGGGTGGGCCTGCTGCCGGGCTGGAGCGAGGAATGGCT GTTTCGCGGCGTGTTGATGTCCCTGCTGGTGGCCAGCCCCTTAGGGTGGACAGGCGGGATCCTGCTGAGCGGCCTCTTGT TTGGCGCCTTGCATTGGCTGGGATGGCAAGGCTGGCCTTATGCCGTCTGGGCCGGTGGGGTTGGTATCCTCATGGGGATT GGCTTGTGGCTGTCGGGAAACCTGTTGGTCACCATTGTCGCCCACACCCTTGTCAACTGGATTGGGGTTTGTGCCTGGAA ATGCTTTTTCTCTCAAGCGGAGCCCTGA
Upstream 100 bases:
>100_bases GCTGTCAACCTGCCGTGAACCTAGGACCGCTGAGATAAACGATGATAAAAACAGCAGCTGCTGTTAACCCTCCGGAGTTC GAAGCCTAGGGATCCCCTCC
Downstream 100 bases:
>100_bases AGGCCCTCTCCCCGTGTGGGAAAGAAGTTGAGGGTGGTCGGTAAGCAGCGCAGAACCTCAGGGAAGTCCCCCAAATTGAG GTGACCGTAACTTATGGTCG
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; CAAX Amino Protease
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTSQIQPCTREQILNGMGITTLFSALIVGLWIWLGSSFPVPFRWDPLALAWGAGLGLGVALLSGGVYRLWPAYRRAATAY LHWVADPLQWGDILWVGLLPGWSEEWLFRGVLMSLLVASPLGWTGGILLSGLLFGALHWLGWQGWPYAVWAGGVGILMGI GLWLSGNLLVTIVAHTLVNWIGVCAWKCFFSQAEP
Sequences:
>Translated_195_residues MTSQIQPCTREQILNGMGITTLFSALIVGLWIWLGSSFPVPFRWDPLALAWGAGLGLGVALLSGGVYRLWPAYRRAATAY LHWVADPLQWGDILWVGLLPGWSEEWLFRGVLMSLLVASPLGWTGGILLSGLLFGALHWLGWQGWPYAVWAGGVGILMGI GLWLSGNLLVTIVAHTLVNWIGVCAWKCFFSQAEP >Mature_194_residues TSQIQPCTREQILNGMGITTLFSALIVGLWIWLGSSFPVPFRWDPLALAWGAGLGLGVALLSGGVYRLWPAYRRAATAYL HWVADPLQWGDILWVGLLPGWSEEWLFRGVLMSLLVASPLGWTGGILLSGLLFGALHWLGWQGWPYAVWAGGVGILMGIG LWLSGNLLVTIVAHTLVNWIGVCAWKCFFSQAEP
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21360; Mature: 21229
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQIQPCTREQILNGMGITTLFSALIVGLWIWLGSSFPVPFRWDPLALAWGAGLGLGVA CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHH LLSGGVYRLWPAYRRAATAYLHWVADPLQWGDILWVGLLPGWSEEWLFRGVLMSLLVASP HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCC LGWTGGILLSGLLFGALHWLGWQGWPYAVWAGGVGILMGIGLWLSGNLLVTIVAHTLVNW CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IGVCAWKCFFSQAEP HHHHHHHHHHHCCCC >Mature Secondary Structure TSQIQPCTREQILNGMGITTLFSALIVGLWIWLGSSFPVPFRWDPLALAWGAGLGLGVA CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHH LLSGGVYRLWPAYRRAATAYLHWVADPLQWGDILWVGLLPGWSEEWLFRGVLMSLLVASP HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCC LGWTGGILLSGLLFGALHWLGWQGWPYAVWAGGVGILMGIGLWLSGNLLVTIVAHTLVNW CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IGVCAWKCFFSQAEP HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA