| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is psaK
Identifier: 86607605
GI number: 86607605
Start: 119664
End: 119909
Strand: Direct
Name: psaK
Synonym: CYB_0103
Alternate gene names: NA
Gene position: 119664-119909 (Clockwise)
Preceding gene: 86607601
Following gene: 86607606
Centisome position: 3.93
GC content: 57.32
Gene sequence:
>246_bases ATGATGCCTGTTGTTGCGCTGTTGGCTCTGACCGCTCAAACCAGCCCCTGGTCCCCCCTGAACGCCGTGATCATTCTGCT CTGCACAGGGCTGGCTTACTTGAGCTTCAAATCCTCCTCTGGAGTGGCCTCAGAGACTGGGCCGGTACTGGGAATGACCT GGCCAGAAGTCATCGGGGTTGCCAGCTTTGGCCATTTGTTGGGAGTGGGGGTCGTTTTGGGCCTCTCTAACATTGGCGTT CTCTAG
Upstream 100 bases:
>100_bases GTAGTGTGAGGTTTTGTTGCAATTCATGTGCAGATTGCGAGGGGATCCCAGCAGGAGGGGTAATCTAAGGGTCGGTTAAC CTGAGCTGAGGATGGAAACC
Downstream 100 bases:
>100_bases GTCGCCACTTCCTTTACATTTCTTGAACTTAGTCCGGATCCCTGCTGGATGATGTTAAGCTCTATTTTAATTCTGAAAGA AGCAGTTTCTTCAGCCGCAT
Product: photosystem I reaction center protein PsaK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MMPVVALLALTAQTSPWSPLNAVIILLCTGLAYLSFKSSSGVASETGPVLGMTWPEVIGVASFGHLLGVGVVLGLSNIGV L
Sequences:
>Translated_81_residues MMPVVALLALTAQTSPWSPLNAVIILLCTGLAYLSFKSSSGVASETGPVLGMTWPEVIGVASFGHLLGVGVVLGLSNIGV L >Mature_81_residues MMPVVALLALTAQTSPWSPLNAVIILLCTGLAYLSFKSSSGVASETGPVLGMTWPEVIGVASFGHLLGVGVVLGLSNIGV L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8195; Mature: 8195
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPVVALLALTAQTSPWSPLNAVIILLCTGLAYLSFKSSSGVASETGPVLGMTWPEVIGV CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH ASFGHLLGVGVVLGLSNIGVL HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMPVVALLALTAQTSPWSPLNAVIILLCTGLAYLSFKSSSGVASETGPVLGMTWPEVIGV CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH ASFGHLLGVGVVLGLSNIGVL HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA