Click here to switch to the map view.

The map label for this gene is 86607557

Identifier: 86607557

GI number: 86607557

Start: 68199

End: 68468

Strand: Direct

Name: 86607557

Synonym: CYB_0055

Alternate gene names: NA

Gene position: 68199-68468 (Clockwise)

Preceding gene: 86607553

Following gene: 86607558

Centisome position: 2.24

GC content: 58.52

Gene sequence:

>270_bases
ATGGATACCCGCCTAATCAACATTGGCTTTGGCAACATCGTCGCCGCTGGGCGTGTGGTCGCCATTGTCAGTCCCGAGTC
AGCTCCCATCAAACGCATCATCAGCGATGCCCGCGAGAGGGGCCAGTTGATAGATGCCACCTATGGTCGTCGTACCCGCG
CTGTCATTATCACCGATTCCGGGCACGTTATCCTCTCCGCCATCCAACCCGAAACCGTTGCCAACCGCTTCCTCACGGCC
AAGCCCGGTTTGTCAGAGGAGACCGAGTGA

Upstream 100 bases:

>100_bases
GAGAACTCAGGTGTCGTTGTGGCAAACCCGCGAAAGAGCCCCATTTGCTACCTTAATGAAGGTTGCTGGCCGGACAACCG
TTAGGTTCCCTCATCACCCC

Downstream 100 bases:

>100_bases
AAGCCCATCGCTGTGAGCCGTTTGAGAAACCAGAAGTGAGATATCCTAAAACCAACCCAAACAAGTCAATTGCCCAGCCG
TCTTGCGTCGGTCTCTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MDTRLINIGFGNIVAAGRVVAIVSPESAPIKRIISDARERGQLIDATYGRRTRAVIITDSGHVILSAIQPETVANRFLTA
KPGLSEETE

Sequences:

>Translated_89_residues
MDTRLINIGFGNIVAAGRVVAIVSPESAPIKRIISDARERGQLIDATYGRRTRAVIITDSGHVILSAIQPETVANRFLTA
KPGLSEETE
>Mature_89_residues
MDTRLINIGFGNIVAAGRVVAIVSPESAPIKRIISDARERGQLIDATYGRRTRAVIITDSGHVILSAIQPETVANRFLTA
KPGLSEETE

Specific function: Unknown

COG id: COG2052

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0296 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y055_SYNJB (Q2JQ60)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_476319.1
- STRING:   Q2JQ60
- GeneID:   3899980
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_0055
- TIGR:   CYB_0055
- eggNOG:   COG2052
- HOGENOM:   HBG286498
- OMA:   KRIISDA
- ProtClustDB:   PRK04323
- BioCyc:   SSP321332:CYB_0055-MONOMER
- HAMAP:   MF_01503
- InterPro:   IPR007169
- ProDom:   PD063023

Pfam domain/function: PF04025 DUF370

EC number: NA

Molecular weight: Translated: 9586; Mature: 9586

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRLINIGFGNIVAAGRVVAIVSPESAPIKRIISDARERGQLIDATYGRRTRAVIITDS
CCCEEEEECCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECC
GHVILSAIQPETVANRFLTAKPGLSEETE
CCEEEEECCCCHHHHCEEECCCCCCCCCC
>Mature Secondary Structure
MDTRLINIGFGNIVAAGRVVAIVSPESAPIKRIISDARERGQLIDATYGRRTRAVIITDS
CCCEEEEECCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECC
GHVILSAIQPETVANRFLTAKPGLSEETE
CCEEEEECCCCHHHHCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA