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The map label for this gene is nrtA [H]

Identifier: 86607537

GI number: 86607537

Start: 43701

End: 45023

Strand: Direct

Name: nrtA [H]

Synonym: CYB_0035

Alternate gene names: 86607537

Gene position: 43701-45023 (Clockwise)

Preceding gene: 86607536

Following gene: 86607538

Centisome position: 1.43

GC content: 59.86

Gene sequence:

>1323_bases
ATGTCTAAGCTGTTCAGCACTTCCTCTCCCGTCTCCCGTCGGCAATTTTTGGCCGGGGTGGCTGCTCTCACGGCTGGGGC
GGCCACGGCTGGGATCCCGCGCGCCCAATCGCAATCCTTGGGCAAAGGCTACTGGGTGGCGCAGGCCGATACTCCCGAAA
CCACCAGCGCCAAGCTGGGGTTCATCGCTCTAACCGACGCGGCCCCCCTGATCATCGCCAAAGAGAAGGGGTTTTTCGAC
AAGTACGGCATGAAAGATGTGGAGGTGGTCAAGCAGGCCTCTTGGGGCACCACCCGCGACAACTTGGTGCTGGGATCCGC
CGCCGGCGGCATCGATGGGGCACACATCCTCACCCCCATGCCCTACCTCATCACCACCGGCAAAGTTACCGATGGCAAGC
CGGTGCCTATGTACATTTTGGCCCGTCTCAATCTGGACGGTCAGGGCATTAGCATTTCCAACCAATATCGGGATTTGCAA
ATCGGCCTGGATAGTTCCCCCCTCAAGGCCAAGTTTGCCGAGGTCCGAGCTGCCGGCGGGGATCCCAAATGTGCAATGAC
CTTCCCTGGTGGCACCCACGACGTGTGGATGCGCTACTGGCTGGCCGCAGGCGGGATCGATCCCACTAGCGACGTCTCCA
TCATTGTGGTGCCGCCGCCGCAGATGGTGGCCAATATGAAATCCAGAACCATGGAAGCCTTCTGTGTGGGCGAGCCTTGG
AATGCCCAGCTGGTGAACCAAAAAGAGGGGTATAGTGCCCTCACCACCGGCGAGCTGTGGAACGGCCACCCGGAAAAGGC
CTTTGCCCTGCGGGCCGACTGGGTGGATGCGCACCCGAAAGCCACCCTTGCCCTGTTGAAAGCGGTGCTGGAAGCCCAGA
TCTGGTGCGACCAGATGGAAAACAAAGAGGAGATGTGTCGCATCATCGGCGACCGCCGCTGGCTGGGGGTTCCCGTGACC
GATATCTTGGGCCGTTCTCGGGGCACTTTTGACTACGGCACCGGCAAGGTCGTTGAAAACAGCCCCCACCTGATGAAGTT
CTGGCAGAACTACGCTTCCTACCCCTTCAAGAGCCACGATCTCTGGTTCTTGACCGAAAACATTCGCTGGGGTTACCTAC
CTGCCGACACCGATACCAAAGCCTTGGTGGAGCGGGTGAATCGGGAAGAACTCTGGCGGGAAGCTGCCAAAGCCATTGGC
CAGGAGGCGGCCATTCCCCCCAGCCCTTCCCGAGGAGTGGAAACCTTCTTCGACGGGGTGCAGTTCGATCCCGAAAATCC
TGCCGCCTACCTGGAGAAATTGGCGATTAAGAAGCTGGCCTAA

Upstream 100 bases:

>100_bases
CCGTCCGCCGCCCAGGCTTCTGTTTTGGTAACCCGCTAGCGGTTCTGTTGCCGTCCTGAAAGTTTTTCTTTCTTCGTCGT
TGTAAATCTTGGAGGTTTCG

Downstream 100 bases:

>100_bases
TTTCCCAACTTTCCCCAGCAAGTTAGCTGCAAACCCTCTGTCCAGGAGAGAAGGGATCCCCGAATCCCCACAAAGAGTGT
TCAACTGAAACCCCTTCTCT

Product: nitrate ABC transporter, periplasmic nitrate-binding protein NrtA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSKLFSTSSPVSRRQFLAGVAALTAGAATAGIPRAQSQSLGKGYWVAQADTPETTSAKLGFIALTDAAPLIIAKEKGFFD
KYGMKDVEVVKQASWGTTRDNLVLGSAAGGIDGAHILTPMPYLITTGKVTDGKPVPMYILARLNLDGQGISISNQYRDLQ
IGLDSSPLKAKFAEVRAAGGDPKCAMTFPGGTHDVWMRYWLAAGGIDPTSDVSIIVVPPPQMVANMKSRTMEAFCVGEPW
NAQLVNQKEGYSALTTGELWNGHPEKAFALRADWVDAHPKATLALLKAVLEAQIWCDQMENKEEMCRIIGDRRWLGVPVT
DILGRSRGTFDYGTGKVVENSPHLMKFWQNYASYPFKSHDLWFLTENIRWGYLPADTDTKALVERVNREELWREAAKAIG
QEAAIPPSPSRGVETFFDGVQFDPENPAAYLEKLAIKKLA

Sequences:

>Translated_440_residues
MSKLFSTSSPVSRRQFLAGVAALTAGAATAGIPRAQSQSLGKGYWVAQADTPETTSAKLGFIALTDAAPLIIAKEKGFFD
KYGMKDVEVVKQASWGTTRDNLVLGSAAGGIDGAHILTPMPYLITTGKVTDGKPVPMYILARLNLDGQGISISNQYRDLQ
IGLDSSPLKAKFAEVRAAGGDPKCAMTFPGGTHDVWMRYWLAAGGIDPTSDVSIIVVPPPQMVANMKSRTMEAFCVGEPW
NAQLVNQKEGYSALTTGELWNGHPEKAFALRADWVDAHPKATLALLKAVLEAQIWCDQMENKEEMCRIIGDRRWLGVPVT
DILGRSRGTFDYGTGKVVENSPHLMKFWQNYASYPFKSHDLWFLTENIRWGYLPADTDTKALVERVNREELWREAAKAIG
QEAAIPPSPSRGVETFFDGVQFDPENPAAYLEKLAIKKLA
>Mature_439_residues
SKLFSTSSPVSRRQFLAGVAALTAGAATAGIPRAQSQSLGKGYWVAQADTPETTSAKLGFIALTDAAPLIIAKEKGFFDK
YGMKDVEVVKQASWGTTRDNLVLGSAAGGIDGAHILTPMPYLITTGKVTDGKPVPMYILARLNLDGQGISISNQYRDLQI
GLDSSPLKAKFAEVRAAGGDPKCAMTFPGGTHDVWMRYWLAAGGIDPTSDVSIIVVPPPQMVANMKSRTMEAFCVGEPWN
AQLVNQKEGYSALTTGELWNGHPEKAFALRADWVDAHPKATLALLKAVLEAQIWCDQMENKEEMCRIIGDRRWLGVPVTD
ILGRSRGTFDYGTGKVVENSPHLMKFWQNYASYPFKSHDLWFLTENIRWGYLPADTDTKALVERVNREELWREAAKAIGQ
EAAIPPSPSRGVETFFDGVQFDPENPAAYLEKLAIKKLA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48114; Mature: 47983

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLFSTSSPVSRRQFLAGVAALTAGAATAGIPRAQSQSLGKGYWVAQADTPETTSAKLG
CCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCCEEEEECCCCCCCCCEEE
FIALTDAAPLIIAKEKGFFDKYGMKDVEVVKQASWGTTRDNLVLGSAAGGIDGAHILTPM
EEEECCCCCEEEEECCCCHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHCCC
PYLITTGKVTDGKPVPMYILARLNLDGQGISISNQYRDLQIGLDSSPLKAKFAEVRAAGG
CEEEEECCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHCCCC
DPKCAMTFPGGTHDVWMRYWLAAGGIDPTSDVSIIVVPPPQMVANMKSRTMEAFCVGEPW
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCEEEEEECCCC
NAQLVNQKEGYSALTTGELWNGHPEKAFALRADWVDAHPKATLALLKAVLEAQIWCDQME
CCEECCCCCCCCEEECCHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
NKEEMCRIIGDRRWLGVPVTDILGRSRGTFDYGTGKVVENSPHLMKFWQNYASYPFKSHD
CHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCC
LWFLTENIRWGYLPADTDTKALVERVNREELWREAAKAIGQEAAIPPSPSRGVETFFDGV
EEEEECCCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCE
QFDPENPAAYLEKLAIKKLA
EECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLFSTSSPVSRRQFLAGVAALTAGAATAGIPRAQSQSLGKGYWVAQADTPETTSAKLG
CCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCCEEEEECCCCCCCCCEEE
FIALTDAAPLIIAKEKGFFDKYGMKDVEVVKQASWGTTRDNLVLGSAAGGIDGAHILTPM
EEEECCCCCEEEEECCCCHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHCCC
PYLITTGKVTDGKPVPMYILARLNLDGQGISISNQYRDLQIGLDSSPLKAKFAEVRAAGG
CEEEEECCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHCCCC
DPKCAMTFPGGTHDVWMRYWLAAGGIDPTSDVSIIVVPPPQMVANMKSRTMEAFCVGEPW
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCEEEEEECCCC
NAQLVNQKEGYSALTTGELWNGHPEKAFALRADWVDAHPKATLALLKAVLEAQIWCDQME
CCEECCCCCCCCEEECCHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
NKEEMCRIIGDRRWLGVPVTDILGRSRGTFDYGTGKVVENSPHLMKFWQNYASYPFKSHD
CHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCC
LWFLTENIRWGYLPADTDTKALVERVNREELWREAAKAIGQEAAIPPSPSRGVETFFDGV
EEEEECCCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCE
QFDPENPAAYLEKLAIKKLA
EECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]