| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86607510
Identifier: 86607510
GI number: 86607510
Start: 6533
End: 7120
Strand: Direct
Name: 86607510
Synonym: CYB_0007
Alternate gene names: NA
Gene position: 6533-7120 (Clockwise)
Preceding gene: 86607509
Following gene: 86607515
Centisome position: 0.21
GC content: 59.86
Gene sequence:
>588_bases GTGAAGTACTTCTGCAGGCGAGTTGGCCGAGGTCGATCTCTCTCCCCGGAAGAGCGTTGGGTTGTTACTGAGGTTCGATT GGCTCAATTGCTCAGGGCAGCGGAAGCCAACTTGCGGGCCAATTCTGAGTTGCGCCAACAGCAGCAGGAGCAGCAAAAGC AACTGGAAGCCGAGCGCCGCCACAGCGAAGCCCTAAGAGACTCGACCGCCGATTTGCGCACCAGCGTGATGGAGCTGCGG GAAGGACAGGCCCTTTGGCAGAGCCATGTGGAAGAGCTGCGCTCTTGTCTGCGGGAGCTGCTCAAGGAACAAAGCGAACT GGTGCAGATTGTTGCCCAGCAGCAGCACATCCTGAAGGATTGTCAGGAAGTCATCCGCGCCATGCTGGAGCAAATGCGAG ATGACCACCGAGACTTCCGCTCTGCCATCAGCATTTTGCTGGAGGAGCTGCACCAAACCGTGCGCTGTTTGGTTATCAGG TCAGGTGGCACCCTACCCAAGCCCGTTCGCCATCCCGAAGTGCCGGAGACGGATCCCGGCTCCCCGCCGACCGATTCGGC CTCGCCTGGGGAAGGCTCTTCGTCCTAG
Upstream 100 bases:
>100_bases AAACAGCCGGGACAAAGCCCGATAGACAGGTCTCTGCTTGGGCTGAAGTCCTATGGTGCTTTGATTTAAAGTAGAGAGTT GTGTATAGGGTGCAGCGACT
Downstream 100 bases:
>100_bases GGATCTTCTGCTCCCCCAAGAGCTATCCCACATCGCCTTCCGGCAGCCACTGCGGCCAGAACAGGCGCAACTCCCTGACC CGCTCCCCTTTGACCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERRHSEALRDSTADLRTSVMELR EGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKDCQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIR SGGTLPKPVRHPEVPETDPGSPPTDSASPGEGSSS
Sequences:
>Translated_195_residues MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERRHSEALRDSTADLRTSVMELR EGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKDCQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIR SGGTLPKPVRHPEVPETDPGSPPTDSASPGEGSSS >Mature_195_residues MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERRHSEALRDSTADLRTSVMELR EGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKDCQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIR SGGTLPKPVRHPEVPETDPGSPPTDSASPGEGSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22367; Mature: 22367
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERR CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HSEALRDSTADLRTSVMELREGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIRSGGTLPKPVRHPEVPETDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SPPTDSASPGEGSSS CCCCCCCCCCCCCCC >Mature Secondary Structure MKYFCRRVGRGRSLSPEERWVVTEVRLAQLLRAAEANLRANSELRQQQQEQQKQLEAERR CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HSEALRDSTADLRTSVMELREGQALWQSHVEELRSCLRELLKEQSELVQIVAQQQHILKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CQEVIRAMLEQMRDDHRDFRSAISILLEELHQTVRCLVIRSGGTLPKPVRHPEVPETDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SPPTDSASPGEGSSS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA