Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607505

Identifier: 86607505

GI number: 86607505

Start: 1493

End: 2317

Strand: Direct

Name: 86607505

Synonym: CYB_0002

Alternate gene names: NA

Gene position: 1493-2317 (Clockwise)

Preceding gene: 86607504

Following gene: 86607509

Centisome position: 0.05

GC content: 59.64

Gene sequence:

>825_bases
TTGAGGTGTTGTTGCCGCGCTGTGGAGCACCTCCAGCCTTGCCCGTCTGCGTGGAGAATCCCTCGGAAAGCGGCTACAGT
AGGGACGCGATGCATGGGGTTGCAGGCGGTGAGACAGTCTGGCAAAGGGCTTCCCCTGGGTATGCTGCTCCTCTGGGCTG
GACTGGTGCCTGGGTGGCCAGTTTGGGCCAATTCCACGCAAGCCAGCATTCAGGATCCGGCGCCGGCCACGCTCTCAGCC
GCTTTGGATTTGGGCTTGGATAGCCAACTTTTGGAAGGCAGCCCCGTGTTGCGCCGCTGGCTGCAAAACCCGCCCCATCT
CCTGGAAGAAATCCGCAACACCCCTGTCTTGCCCACGCGCTTGCAGGCCGGTTTTGAGTCCTCTTCGCACTGGCGAATCA
GCCTACAAGACTTGCGTCTGGGAGATCGCCTCACCCTCAGCGGTGACTATCGCCAATCTTCCGAACATCCCGAAGTGCGC
CAGTACGGGTCGGAAATGCGTTACTTTCTGGCCCCCATGGGATCCCGTTTTAATCTGGCGCCACAACTGGGGTATCGGGC
TTTGGAACAAAAGAACCGCAGCCTCAGTGGAGTTAGCTATGGGGCTTTTGCTGTTTTGGCCTTGGCTCCGGGAGGTGTAG
ATTTGACCGGCAGCTACAGTTGGGTTGCCCCCCAGGAGCCGGAAGAAGGACAGGCCACCCTGGCGGAGCTCACTGCTGCC
TACGCCATTAGCCCTTCCTTTCGTCTTTCTGCTCGCTATAGCCTGCGCAACTCGACCCTGGATCGGGAGTTTAGCTTTGG
CGTTGGGCTGGAGTGGATCCCATAG

Upstream 100 bases:

>100_bases
AGTCTGCAATTTGAACGGCAACTGCAAAAATTGGTCGAGCGCTTGCGGGTGGTTGCCAACAGCCGGAGCAGCTAGGCTTT
CTGTTGTCGCTGGGCCGTCT

Downstream 100 bases:

>100_bases
AGTGCCCCCTCACTCCTAGTCTCTCTCTTGGTGGAAGAGGGGAGCCAGGGATCGGCATGACTTGGATTGGGGTAATGGCT
CCGACATCGACTCGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRCCCRAVEHLQPCPSAWRIPRKAATVGTRCMGLQAVRQSGKGLPLGMLLLWAGLVPGWPVWANSTQASIQDPAPATLSA
ALDLGLDSQLLEGSPVLRRWLQNPPHLLEEIRNTPVLPTRLQAGFESSSHWRISLQDLRLGDRLTLSGDYRQSSEHPEVR
QYGSEMRYFLAPMGSRFNLAPQLGYRALEQKNRSLSGVSYGAFAVLALAPGGVDLTGSYSWVAPQEPEEGQATLAELTAA
YAISPSFRLSARYSLRNSTLDREFSFGVGLEWIP

Sequences:

>Translated_274_residues
MRCCCRAVEHLQPCPSAWRIPRKAATVGTRCMGLQAVRQSGKGLPLGMLLLWAGLVPGWPVWANSTQASIQDPAPATLSA
ALDLGLDSQLLEGSPVLRRWLQNPPHLLEEIRNTPVLPTRLQAGFESSSHWRISLQDLRLGDRLTLSGDYRQSSEHPEVR
QYGSEMRYFLAPMGSRFNLAPQLGYRALEQKNRSLSGVSYGAFAVLALAPGGVDLTGSYSWVAPQEPEEGQATLAELTAA
YAISPSFRLSARYSLRNSTLDREFSFGVGLEWIP
>Mature_274_residues
MRCCCRAVEHLQPCPSAWRIPRKAATVGTRCMGLQAVRQSGKGLPLGMLLLWAGLVPGWPVWANSTQASIQDPAPATLSA
ALDLGLDSQLLEGSPVLRRWLQNPPHLLEEIRNTPVLPTRLQAGFESSSHWRISLQDLRLGDRLTLSGDYRQSSEHPEVR
QYGSEMRYFLAPMGSRFNLAPQLGYRALEQKNRSLSGVSYGAFAVLALAPGGVDLTGSYSWVAPQEPEEGQATLAELTAA
YAISPSFRLSARYSLRNSTLDREFSFGVGLEWIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30120; Mature: 30120

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCCCRAVEHLQPCPSAWRIPRKAATVGTRCMGLQAVRQSGKGLPLGMLLLWAGLVPGWP
CCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
VWANSTQASIQDPAPATLSAALDLGLDSQLLEGSPVLRRWLQNPPHLLEEIRNTPVLPTR
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCHH
LQAGFESSSHWRISLQDLRLGDRLTLSGDYRQSSEHPEVRQYGSEMRYFLAPMGSRFNLA
HHHCCCCCCCEEEEEHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PQLGYRALEQKNRSLSGVSYGAFAVLALAPGGVDLTGSYSWVAPQEPEEGQATLAELTAA
HHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCEEECCCEEECCCCCCCCHHHHHHHHHHH
YAISPSFRLSARYSLRNSTLDREFSFGVGLEWIP
HHCCCCEEEEEEEHHHCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MRCCCRAVEHLQPCPSAWRIPRKAATVGTRCMGLQAVRQSGKGLPLGMLLLWAGLVPGWP
CCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
VWANSTQASIQDPAPATLSAALDLGLDSQLLEGSPVLRRWLQNPPHLLEEIRNTPVLPTR
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCHH
LQAGFESSSHWRISLQDLRLGDRLTLSGDYRQSSEHPEVRQYGSEMRYFLAPMGSRFNLA
HHHCCCCCCCEEEEEHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PQLGYRALEQKNRSLSGVSYGAFAVLALAPGGVDLTGSYSWVAPQEPEEGQATLAELTAA
HHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCEEECCCEEECCCCCCCCHHHHHHHHHHH
YAISPSFRLSARYSLRNSTLDREFSFGVGLEWIP
HHCCCCEEEEEEEHHHCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA