Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606787

Identifier: 86606787

GI number: 86606787

Start: 2160096

End: 2161619

Strand: Reverse

Name: 86606787

Synonym: CYA_2147

Alternate gene names: NA

Gene position: 2161619-2160096 (Counterclockwise)

Preceding gene: 86606788

Following gene: 86606783

Centisome position: 73.71

GC content: 64.57

Gene sequence:

>1524_bases
TTGGGCAAGCTGTGGGTTGGCATGGTGTTGTCGCGCTCCACTTGGCTGTGGTTGTTGACGGGGCTGGGCTTGGCGGCTCT
CAGCCAATACCTGCAATGGGTTGAGGGCATCTACAGCTTTGTGGCTCCCTATTCGGTGCCGCTGGCGGATCTGGCGGTGG
CCGGCATCCTGGGCGGAACAGTGGCGGCAGGGCTGGTGGCACGCCATTGGTGGCAACAGGTTCGCCGACCGCAACAGGAT
CCCACCCCAGCGGCTAAGCCGCGGCGGCGGGTTAAGTTGACGCGGGATCAGGTGCAAGCAGATCTGCAGGATGTCGATCG
CCTTATCCAGAAGCTGCAGGACGACATTAGCCGTCGCGCCTTGCAGGCCAAGGCGCGGGAGATCGATCGACGGCTGGCCC
AGGAAGAATTGCACCTGGTGGTGTTCGGCACCGCTTCTGCCGGCAAAACCTCTCTCATCAACGCTCTGCTGGGGCAGCCT
GTGGGGGAAACCGCTCCCACCCTGGGCACCACCCAGCAGGGATCCATTCACACCTATCAACTGGAGGGCTGGAGTGGCCC
CATCTCCCTCACCGATACCCCTGGCCTGCTGACCATCGGCGGCGCCGGCGAGGCGGAGGCCCGCGCCCTGGCCCAGAAGG
CGGATCTGTTGATTTTGGTGGTGGCTGGGGATCTGCTGGCCTCAGAATATGCCGAGCTGCTCGAGCTGGCCCGGCTGGGG
AAATCCACCATCCTGGCCCTTAACAAGACGGATCAGATGTTGCCGGAGGAGGTGGAGATCATCTTGGCCCACCTGCGCCA
GCGCACCGCCGGCGTCATTCCCCCTGAGCAGGTGGTGGCCATTGCCGCCGACCCGGAGCCCTTGAAGGTTCGCTACTGCT
TCCCCGATGGCTCCAGACAAGAAACCTGGGAGCCGCAGCCCCCCGATACAGGCGCCCTGGTCCAGCAGATGGCCCGCCTG
CTGCAGCAAAAGGGATCCCATCTGCGCCTGGCCAACGCCCTGTTGCAAACCCAAACCTTGAGCGAGGCCGTCCAACAGGC
CCTGCGGGAAGAGCGCTACCACCAGGGTCGCCAGATCGTGGAGCGGATGCAGTGGGCCACCGCTGCTGCCCTGGCCGTGA
CTCCCCTTCCGGCTTTGGATATGCTGGCGGGGGTGGTCATCCAGGCGCGCATGATCGGGGAGCTGCATCAGGTGTTCGAT
CGCCGCATCACCCTGCAGCAGGCTCAACAAATGGCCCACAGCCTGGCGCAAATGATCGTGCAGCTTGGGGGACTGGAGCT
GGCCACCCAGGCCCTGGGCTCTGCCCTCAAAGCCAGTCCCTGGATGCTCATGGGGATCCCGCTGCAGGCGGCCAGCGGAG
CCTATCTGACGCGGGTGGCGGGGCTGAGCTACCTGGAGTGGCTGCAATCGGGGGATCCCTGGCAAGAGGAGCTCCTGCAA
GAGCGGCTCAAGCAGCAGCTTCACAGCCGTTATCCGCTGGCCTTTCTCAAGCAATTGGCTCGCCAAGCCCACTCCAGCAG
CTAG

Upstream 100 bases:

>100_bases
GTCCTAAATTCGCGAACGCTTCTCTCGCCTTTGCAGATCTCTAGACTAGATAGATCTTCAGGGTTTGCCTGGGGATCAGG
ATCTGTTCCCGATTGGGCAT

Downstream 100 bases:

>100_bases
CCGAACAGCCCAAGCTCAGCTAGGGCCATTTCAAAAGCAAAAAACCCGTCGCTAGCCCAAAGCAACCCCCTCGGCGGCAT
GGCCATTCGCCGGCAACTGG

Product: GTP-binding domain-containing protein

Products: NA

Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MGKLWVGMVLSRSTWLWLLTGLGLAALSQYLQWVEGIYSFVAPYSVPLADLAVAGILGGTVAAGLVARHWWQQVRRPQQD
PTPAAKPRRRVKLTRDQVQADLQDVDRLIQKLQDDISRRALQAKAREIDRRLAQEELHLVVFGTASAGKTSLINALLGQP
VGETAPTLGTTQQGSIHTYQLEGWSGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAELLELARLG
KSTILALNKTDQMLPEEVEIILAHLRQRTAGVIPPEQVVAIAADPEPLKVRYCFPDGSRQETWEPQPPDTGALVQQMARL
LQQKGSHLRLANALLQTQTLSEAVQQALREERYHQGRQIVERMQWATAAALAVTPLPALDMLAGVVIQARMIGELHQVFD
RRITLQQAQQMAHSLAQMIVQLGGLELATQALGSALKASPWMLMGIPLQAASGAYLTRVAGLSYLEWLQSGDPWQEELLQ
ERLKQQLHSRYPLAFLKQLARQAHSSS

Sequences:

>Translated_507_residues
MGKLWVGMVLSRSTWLWLLTGLGLAALSQYLQWVEGIYSFVAPYSVPLADLAVAGILGGTVAAGLVARHWWQQVRRPQQD
PTPAAKPRRRVKLTRDQVQADLQDVDRLIQKLQDDISRRALQAKAREIDRRLAQEELHLVVFGTASAGKTSLINALLGQP
VGETAPTLGTTQQGSIHTYQLEGWSGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAELLELARLG
KSTILALNKTDQMLPEEVEIILAHLRQRTAGVIPPEQVVAIAADPEPLKVRYCFPDGSRQETWEPQPPDTGALVQQMARL
LQQKGSHLRLANALLQTQTLSEAVQQALREERYHQGRQIVERMQWATAAALAVTPLPALDMLAGVVIQARMIGELHQVFD
RRITLQQAQQMAHSLAQMIVQLGGLELATQALGSALKASPWMLMGIPLQAASGAYLTRVAGLSYLEWLQSGDPWQEELLQ
ERLKQQLHSRYPLAFLKQLARQAHSSS
>Mature_506_residues
GKLWVGMVLSRSTWLWLLTGLGLAALSQYLQWVEGIYSFVAPYSVPLADLAVAGILGGTVAAGLVARHWWQQVRRPQQDP
TPAAKPRRRVKLTRDQVQADLQDVDRLIQKLQDDISRRALQAKAREIDRRLAQEELHLVVFGTASAGKTSLINALLGQPV
GETAPTLGTTQQGSIHTYQLEGWSGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAELLELARLGK
STILALNKTDQMLPEEVEIILAHLRQRTAGVIPPEQVVAIAADPEPLKVRYCFPDGSRQETWEPQPPDTGALVQQMARLL
QQKGSHLRLANALLQTQTLSEAVQQALREERYHQGRQIVERMQWATAAALAVTPLPALDMLAGVVIQARMIGELHQVFDR
RITLQQAQQMAHSLAQMIVQLGGLELATQALGSALKASPWMLMGIPLQAASGAYLTRVAGLSYLEWLQSGDPWQEELLQE
RLKQQLHSRYPLAFLKQLARQAHSSS

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55637; Mature: 55506

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLWVGMVLSRSTWLWLLTGLGLAALSQYLQWVEGIYSFVAPYSVPLADLAVAGILGGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VAAGLVARHWWQQVRRPQQDPTPAAKPRRRVKLTRDQVQADLQDVDRLIQKLQDDISRRA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAKAREIDRRLAQEELHLVVFGTASAGKTSLINALLGQPVGETAPTLGTTQQGSIHTYQ
HHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
LEGWSGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAELLELARLG
ECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCC
KSTILALNKTDQMLPEEVEIILAHLRQRTAGVIPPEQVVAIAADPEPLKVRYCFPDGSRQ
CHHEEEECCCHHHCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEEECCCCCCC
ETWEPQPPDTGALVQQMARLLQQKGSHLRLANALLQTQTLSEAVQQALREERYHQGRQIV
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMQWATAAALAVTPLPALDMLAGVVIQARMIGELHQVFDRRITLQQAQQMAHSLAQMIV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGGLELATQALGSALKASPWMLMGIPLQAASGAYLTRVAGLSYLEWLQSGDPWQEELLQ
HHCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
ERLKQQLHSRYPLAFLKQLARQAHSSS
HHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKLWVGMVLSRSTWLWLLTGLGLAALSQYLQWVEGIYSFVAPYSVPLADLAVAGILGGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VAAGLVARHWWQQVRRPQQDPTPAAKPRRRVKLTRDQVQADLQDVDRLIQKLQDDISRRA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAKAREIDRRLAQEELHLVVFGTASAGKTSLINALLGQPVGETAPTLGTTQQGSIHTYQ
HHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
LEGWSGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAELLELARLG
ECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCC
KSTILALNKTDQMLPEEVEIILAHLRQRTAGVIPPEQVVAIAADPEPLKVRYCFPDGSRQ
CHHEEEECCCHHHCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEEECCCCCCC
ETWEPQPPDTGALVQQMARLLQQKGSHLRLANALLQTQTLSEAVQQALREERYHQGRQIV
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMQWATAAALAVTPLPALDMLAGVVIQARMIGELHQVFDRRITLQQAQQMAHSLAQMIV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGGLELATQALGSALKASPWMLMGIPLQAASGAYLTRVAGLSYLEWLQSGDPWQEELLQ
HHCCHHHHHHHHHHHHHCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
ERLKQQLHSRYPLAFLKQLARQAHSSS
HHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA