| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is ychM [C]
Identifier: 86606723
GI number: 86606723
Start: 2102434
End: 2102694
Strand: Reverse
Name: ychM [C]
Synonym: CYA_2083
Alternate gene names: 86606723
Gene position: 2102694-2102434 (Counterclockwise)
Preceding gene: 86606728
Following gene: 86606722
Centisome position: 71.7
GC content: 56.32
Gene sequence:
>261_bases GTGTTACCCTTTGAAAGGACTTATCGGCAACTGAGGAGTGTTCGAGTAGCTGTGGTGAGTCAGCCAACTGTGGCTACGGA TGACGCAGGCCAAGGGTGGAAAAAGCTTTTGGCGCGCTGGCGCGGCGACCTTATGGGCGGCTTGACCACAGCAGTGGTGG CTTTGCCGCTAGCGCTTGCCTTTGCCATTGCCAGCGGCGTTGATCCTAAAGCGGGGCTTTACACAGCAATTGTAGCTGGA TTTAACACTCCCACCGCCTGA
Upstream 100 bases:
>100_bases TGCTCACACTCTGGCTTTATCCGTCAACTGCCGCTGAGGCACTCAGCGACGCTACACCTTCCCCGGTGCCATTGAGTCCG TATACACATTTGTAAACACT
Downstream 100 bases:
>100_bases AGGCGGGGGATTCTTACGCAGTCCACAAAAGAACCCGTAACGGCGTTGTCAAAGCGCCTCTAGACAGTTCCTTCACGCAA AGCTCCAAGGTTCTGCTGAC
Product: sulfate permease (SulP) family protein truncation
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MLPFERTYRQLRSVRVAVVSQPTVATDDAGQGWKKLLARWRGDLMGGLTTAVVALPLALAFAIASGVDPKAGLYTAIVAG FNTPTA
Sequences:
>Translated_86_residues MLPFERTYRQLRSVRVAVVSQPTVATDDAGQGWKKLLARWRGDLMGGLTTAVVALPLALAFAIASGVDPKAGLYTAIVAG FNTPTA >Mature_86_residues MLPFERTYRQLRSVRVAVVSQPTVATDDAGQGWKKLLARWRGDLMGGLTTAVVALPLALAFAIASGVDPKAGLYTAIVAG FNTPTA
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9088; Mature: 9088
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFERTYRQLRSVRVAVVSQPTVATDDAGQGWKKLLARWRGDLMGGLTTAVVALPLALA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAIASGVDPKAGLYTAIVAGFNTPTA HHHHCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLPFERTYRQLRSVRVAVVSQPTVATDDAGQGWKKLLARWRGDLMGGLTTAVVALPLALA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAIASGVDPKAGLYTAIVAGFNTPTA HHHHCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA