Click here to switch to the map view.

The map label for this gene is cbbYC [H]

Identifier: 86606698

GI number: 86606698

Start: 2076422

End: 2077198

Strand: Reverse

Name: cbbYC [H]

Synonym: CYA_2058

Alternate gene names: 86606698

Gene position: 2077198-2076422 (Counterclockwise)

Preceding gene: 86606701

Following gene: 86606697

Centisome position: 70.83

GC content: 63.71

Gene sequence:

>777_bases
ATGGAACTGCAGGCGTTCATTTTTGATGTGGATGGCACGCTGGCGGATACGGAGCGGGATGGGCACCGCGTGGCTTTCAA
CGCCGCCTTTGCCGAGGCAGGGTTGGACTGGCACTGGTCGGTGGAGCTCTACGGCCAGCTCCTGGCCATCACCGGCGGCA
AAGAGCGCATTCGCCACTTCGTCCAGACCTGCCAGCCGCCCCTGCCTGCCGGCGAAGACCTGACCAGTCTAATAGCCCGG
CTGCACCAGGCCAAGACCCGCCACTACACAGCTCTGTTGGCCCAAGGAGGGATCCCTTTGCGCCCCGGCGTCAAGCGCCT
CTTACAGGAAGCCAGAGCCGCCGGGATCCGCCTGGCCATCGCCACCACCACCACGCCCGAAAACGTGACGGCCCTTCTGG
AGCACACCCTGCCAGAAAGCCTGAGCTGGTTTGAGGTGATCGCTGCCGGCGATATTGTCCCCGCCAAAAAGCCAGCCCCC
GACATCTACTGCTACACGCTGGAACAGATGGGGCTGCGCCCCCAGGAGTGCCTGGCCTTTGAGGACTCGGAGAACGGGCT
GCGCTCGGCCCAGCAGGCGGGCGTCCCAGCCGTGGTGACAGTAAACAACTATACGCGGGAGCAAGACTTTTCGGGAGCGG
CTTTGGTGTTGGATCACCTAGGGGAGCCTGGGCTGCCGTTTCAGGTGTTGGCGGGAAGGGCGGGATCCCACAGCCACTTT
ACTCTGGAGCTGGCTCGCCAAGTCCACGCTCAAGCCCTCGCCGGACAAGAAAAGTGA

Upstream 100 bases:

>100_bases
CCTTCCCAGGAACCTGGCTGAGAGCATCCAAACCATGAGGTAGCATAGGGTCGCTTGCCCAGTTGACAAGAGGCTGGCGG
GGTGGGAACGGGGGATGCGC

Downstream 100 bases:

>100_bases
CCCGAGAGCCCAATCTGCAACAGCGCCTCCGGGAGCACCTGCAGCAAGTAGCTCAGCCCCGCGATCCCGACTGGTCGCCT
TTGGGCCACCGGCAGGTGGA

Product: HAD family hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MELQAFIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHFVQTCQPPLPAGEDLTSLIAR
LHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAIATTTTPENVTALLEHTLPESLSWFEVIAAGDIVPAKKPAP
DIYCYTLEQMGLRPQECLAFEDSENGLRSAQQAGVPAVVTVNNYTREQDFSGAALVLDHLGEPGLPFQVLAGRAGSHSHF
TLELARQVHAQALAGQEK

Sequences:

>Translated_258_residues
MELQAFIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHFVQTCQPPLPAGEDLTSLIAR
LHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAIATTTTPENVTALLEHTLPESLSWFEVIAAGDIVPAKKPAP
DIYCYTLEQMGLRPQECLAFEDSENGLRSAQQAGVPAVVTVNNYTREQDFSGAALVLDHLGEPGLPFQVLAGRAGSHSHF
TLELARQVHAQALAGQEK
>Mature_258_residues
MELQAFIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHFVQTCQPPLPAGEDLTSLIAR
LHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAIATTTTPENVTALLEHTLPESLSWFEVIAAGDIVPAKKPAP
DIYCYTLEQMGLRPQECLAFEDSENGLRSAQQAGVPAVVTVNNYTREQDFSGAALVLDHLGEPGLPFQVLAGRAGSHSHF
TLELARQVHAQALAGQEK

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=217, Percent_Identity=27.6497695852535, Blast_Score=62, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116008157, Length=220, Percent_Identity=28.1818181818182, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 28047; Mature: 28047

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQAFIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHF
CCCEEEEEECCCCEECCCCCCCEEEEEEHHHHCCCCEEEEHEEEEEEEEEECCHHHHHHH
VQTCQPPLPAGEDLTSLIARLHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEE
ATTTTPENVTALLEHTLPESLSWFEVIAAGDIVPAKKPAPDIYCYTLEQMGLRPQECLAF
EECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCCHHHHEEE
EDSENGLRSAQQAGVPAVVTVNNYTREQDFSGAALVLDHLGEPGLPFQVLAGRAGSHSHF
CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCHHEECCCCCCCCHH
TLELARQVHAQALAGQEK
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELQAFIFDVDGTLADTERDGHRVAFNAAFAEAGLDWHWSVELYGQLLAITGGKERIRHF
CCCEEEEEECCCCEECCCCCCCEEEEEEHHHHCCCCEEEEHEEEEEEEEEECCHHHHHHH
VQTCQPPLPAGEDLTSLIARLHQAKTRHYTALLAQGGIPLRPGVKRLLQEARAAGIRLAI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEE
ATTTTPENVTALLEHTLPESLSWFEVIAAGDIVPAKKPAPDIYCYTLEQMGLRPQECLAF
EECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCCHHHHEEE
EDSENGLRSAQQAGVPAVVTVNNYTREQDFSGAALVLDHLGEPGLPFQVLAGRAGSHSHF
CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCHHEECCCCCCCCHH
TLELARQVHAQALAGQEK
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1429456 [H]