BacMap

Definition	Synechococcus sp. JA-3-3Ab, complete genome.
Accession	NC_007775
Length	2,932,766

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The map label for this gene is livG [H]

Identifier: 86606567

GI number: 86606567

Start: 1931761

End: 1932528

Strand: Reverse

Name: livG [H]

Synonym: CYA_1921

Alternate gene names: 86606567

Gene position: 1932528-1931761 (Counterclockwise)

Preceding gene: 86606568

Following gene: 86606566

Centisome position: 65.89

GC content: 51.82

Gene sequence:

>768_bases
ATGCTTACTGCAGCTCCCACCGCCACCCGACAAATTTTACAAACTCAGGATCTCACCGTCAGCTTTGATGGCTTCAAGGC
TTTGGACAGGCTGAACTTCTCTCTGGAGGAAGGGGAGCTGCGGGTGGTCATCGGCCCCAATGGGGCAGGCAAGACTACGT
TTCTCGATGTGCTGACGGGCAAGGTTAAGCCCACCCGAGGACGGGTGCTGTTCAAAGGAAAGGATCTGGCCAAGCTCAAG
GAACACGAGATCTCGATTTTGGGTGTTGGGCGCAAGTTTCAGACGCCGCGGGTCTATCAAAACTTGAGCGTGCGAGAAAA
CTTGGAGCTATCCCTCAACCCTGACAAAAGGGTTTTTTCCACCCTATTGGGCAAAAAGCATCTGCGAGAAAAAACGGATG
CTCTTTTGGAAACCATTGGCCTCAGCCGTAAGGATCGGGTTCCGGCAGGGCTGCTTTCCCACGGAGAAAAGCAATGGCTG
GAGATCGGCATGGTGATTGCTCAAGATCCGGATTTGCTGCTGCTGGATGAATGCGTGGCCGGGATGACGGACAAAGAAAC
AGAAGCTACAGGAGAGTTAATTCAATCCTTAGCCCAAAGCCACACCATTTTGGTGATCGAACATGACATGGTGTTTGTCC
GACAAATTGCCCGCAAGGTTACCGTTTTACACCAAGGCTCGGTGCTGTGCGAAGGTACCTTTGAGGATGTGAAAAACGAC
CCGCGAGTGATTGAGGTCTATCTTGGATCCCACAAGGGGAAAAACTAA

Upstream 100 bases:

>100_bases
AGCCAGCGATGCCAAGTTTCCTCTCCTATTTGATGGGTTTATTTGATGGGTTGAGAATCCGGTTTGACCTTTGGCCTTTC
CGTTCTTGGATGTGATCCCC

Downstream 100 bases:

>100_bases
GCAAAGAGGCTATAGTTCTGTATCTAATCGACTCATGCGCAGGCCTATGAATACGGAAAACGCGACCGCAACACAAAACT
TATCCCGAGATGGATCCGGG

Product: urea ABC transporter, ATP-binding protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLTAAPTATRQILQTQDLTVSFDGFKALDRLNFSLEEGELRVVIGPNGAGKTTFLDVLTGKVKPTRGRVLFKGKDLAKLK
EHEISILGVGRKFQTPRVYQNLSVRENLELSLNPDKRVFSTLLGKKHLREKTDALLETIGLSRKDRVPAGLLSHGEKQWL
EIGMVIAQDPDLLLLDECVAGMTDKETEATGELIQSLAQSHTILVIEHDMVFVRQIARKVTVLHQGSVLCEGTFEDVKND
PRVIEVYLGSHKGKN

Sequences:

>Translated_255_residues
MLTAAPTATRQILQTQDLTVSFDGFKALDRLNFSLEEGELRVVIGPNGAGKTTFLDVLTGKVKPTRGRVLFKGKDLAKLK
EHEISILGVGRKFQTPRVYQNLSVRENLELSLNPDKRVFSTLLGKKHLREKTDALLETIGLSRKDRVPAGLLSHGEKQWL
EIGMVIAQDPDLLLLDECVAGMTDKETEATGELIQSLAQSHTILVIEHDMVFVRQIARKVTVLHQGSVLCEGTFEDVKND
PRVIEVYLGSHKGKN
>Mature_255_residues
MLTAAPTATRQILQTQDLTVSFDGFKALDRLNFSLEEGELRVVIGPNGAGKTTFLDVLTGKVKPTRGRVLFKGKDLAKLK
EHEISILGVGRKFQTPRVYQNLSVRENLELSLNPDKRVFSTLLGKKHLREKTDALLETIGLSRKDRVPAGLLSHGEKQWL
EIGMVIAQDPDLLLLDECVAGMTDKETEATGELIQSLAQSHTILVIEHDMVFVRQIARKVTVLHQGSVLCEGTFEDVKND
PRVIEVYLGSHKGKN

Specific function: Probable component of a branched-chain amino-acid transport system [H]

COG id: COG4674

COG function: function code R; Uncharacterized ABC-type transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=218, Percent_Identity=28.4403669724771, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI116734710, Length=209, Percent_Identity=29.6650717703349, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=26.5116279069767, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI27436953, Length=214, Percent_Identity=30.3738317757009, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI150417984, Length=232, Percent_Identity=25.8620689655172, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI21536376, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI27881501, Length=207, Percent_Identity=27.536231884058, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI30795238, Length=207, Percent_Identity=27.536231884058, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI6005701, Length=221, Percent_Identity=27.6018099547511, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI27477115, Length=221, Percent_Identity=26.6968325791855, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI73747915, Length=234, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27262624, Length=222, Percent_Identity=25.2252252252252, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27262626, Length=222, Percent_Identity=25.2252252252252, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI148612844, Length=220, Percent_Identity=28.1818181818182, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=220, Percent_Identity=28.1818181818182, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI90421313, Length=225, Percent_Identity=25.3333333333333, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI157502203, Length=249, Percent_Identity=24.4979919678715, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI157502201, Length=249, Percent_Identity=24.4979919678715, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI31657092, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI156105685, Length=227, Percent_Identity=26.8722466960352, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI171184400, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI21536378, Length=217, Percent_Identity=28.110599078341, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=38.0952380952381, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=30.7017543859649, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=30.1801801801802, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789962, Length=228, Percent_Identity=31.140350877193, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87081782, Length=242, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787792, Length=221, Percent_Identity=28.9592760180996, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788472, Length=229, Percent_Identity=26.6375545851528, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI87082268, Length=245, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1789032, Length=212, Percent_Identity=28.3018867924528, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1790190, Length=242, Percent_Identity=29.7520661157025, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=29.5964125560538, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788897, Length=233, Percent_Identity=27.4678111587983, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI87081791, Length=247, Percent_Identity=24.2914979757085, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787500, Length=259, Percent_Identity=27.027027027027, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788210, Length=219, Percent_Identity=26.027397260274, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788761, Length=251, Percent_Identity=26.2948207171315, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789873, Length=208, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789593, Length=238, Percent_Identity=25.6302521008403, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786698, Length=231, Percent_Identity=28.1385281385281, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI87081834, Length=201, Percent_Identity=26.865671641791, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994943, Length=234, Percent_Identity=26.4957264957265, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790467, Length=247, Percent_Identity=28.3400809716599, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1788225, Length=250, Percent_Identity=25.2, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1786872, Length=207, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786253, Length=225, Percent_Identity=25.3333333333333, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082267, Length=247, Percent_Identity=28.3400809716599, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789991, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786803, Length=237, Percent_Identity=22.3628691983122, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789586, Length=225, Percent_Identity=25.3333333333333, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=248, Percent_Identity=21.3709677419355, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1786563, Length=219, Percent_Identity=28.310502283105, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790162, Length=252, Percent_Identity=25.7936507936508, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787089, Length=227, Percent_Identity=27.7533039647577, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788450, Length=219, Percent_Identity=27.3972602739726, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787548, Length=236, Percent_Identity=29.2372881355932, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787370, Length=247, Percent_Identity=22.6720647773279, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI48994883, Length=261, Percent_Identity=28.735632183908, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789672, Length=233, Percent_Identity=22.3175965665236, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=25.8771929824561, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787759, Length=258, Percent_Identity=25.1937984496124, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788506, Length=261, Percent_Identity=27.2030651340996, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=27.4590163934426, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790544, Length=248, Percent_Identity=22.9838709677419, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=22.7848101265823, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787041, Length=232, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787547, Length=230, Percent_Identity=25.6521739130435, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=29.9019607843137, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI145693107, Length=225, Percent_Identity=27.1111111111111, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788644, Length=239, Percent_Identity=25.5230125523013, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788165, Length=238, Percent_Identity=26.0504201680672, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=24.6575342465753, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=23.6607142857143, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786319, Length=231, Percent_Identity=25.974025974026, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=189, Percent_Identity=29.1005291005291, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786654, Length=232, Percent_Identity=26.2931034482759, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786981, Length=214, Percent_Identity=29.4392523364486, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=229, Percent_Identity=24.4541484716157, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=229, Percent_Identity=24.4541484716157, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=229, Percent_Identity=24.4541484716157, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=230, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI115533608, Length=205, Percent_Identity=29.2682926829268, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=25.9433962264151, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=212, Percent_Identity=24.5283018867925, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=214, Percent_Identity=26.1682242990654, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=202, Percent_Identity=24.2574257425743, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=219, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17511077, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=243, Percent_Identity=25.5144032921811, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=249, Percent_Identity=24.4979919678715, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=223, Percent_Identity=22.8699551569507, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=222, Percent_Identity=22.5225225225225, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=245, Percent_Identity=26.530612244898, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221512771, Length=228, Percent_Identity=28.0701754385965, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24643674, Length=223, Percent_Identity=26.9058295964126, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=24.5614035087719, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007184, Length=209, Percent_Identity=22.9665071770335, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221500365, Length=209, Percent_Identity=22.9665071770335, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24648314, Length=235, Percent_Identity=24.2553191489362, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85726357, Length=220, Percent_Identity=23.6363636363636, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI23397593, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574533, Length=200, Percent_Identity=29.5, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28318; Mature: 28318

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAAPTATRQILQTQDLTVSFDGFKALDRLNFSLEEGELRVVIGPNGAGKTTFLDVLTG
CCCCCCHHHHHHHHHCCCEEEECCHHHHHHCCCEECCCCEEEEECCCCCCCCEEEEHHHC
KVKPTRGRVLFKGKDLAKLKEHEISILGVGRKFQTPRVYQNLSVRENLELSLNPDKRVFS
CCCCCCCEEEECCCCHHHHHHCCEEEEECCCCCCCCHHHHCCCCCCCCEEEECCHHHHHH
TLLGKKHLREKTDALLETIGLSRKDRVPAGLLSHGEKQWLEIGMVIAQDPDLLLLDECVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHEEEEEECCCCEEEHHHHHC
GMTDKETEATGELIQSLAQSHTILVIEHDMVFVRQIARKVTVLHQGSVLCEGTFEDVKND
CCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHEECCCEEECCCHHHCCCC
PRVIEVYLGSHKGKN
CEEEEEEECCCCCCC
>Mature Secondary Structure
MLTAAPTATRQILQTQDLTVSFDGFKALDRLNFSLEEGELRVVIGPNGAGKTTFLDVLTG
CCCCCCHHHHHHHHHCCCEEEECCHHHHHHCCCEECCCCEEEEECCCCCCCCEEEEHHHC
KVKPTRGRVLFKGKDLAKLKEHEISILGVGRKFQTPRVYQNLSVRENLELSLNPDKRVFS
CCCCCCCEEEECCCCHHHHHHCCEEEEECCCCCCCCHHHHCCCCCCCCEEEECCHHHHHH
TLLGKKHLREKTDALLETIGLSRKDRVPAGLLSHGEKQWLEIGMVIAQDPDLLLLDECVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHEEEEEECCCCEEEHHHHHC
GMTDKETEATGELIQSLAQSHTILVIEHDMVFVRQIARKVTVLHQGSVLCEGTFEDVKND
CCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHEECCCEEECCCHHHCCCC
PRVIEVYLGSHKGKN
CEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]