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The map label for this gene is ygeR [H]

Identifier: 86606542

GI number: 86606542

Start: 1903557

End: 1905149

Strand: Reverse

Name: ygeR [H]

Synonym: CYA_1895

Alternate gene names: 86606542

Gene position: 1905149-1903557 (Counterclockwise)

Preceding gene: 86606544

Following gene: 86606541

Centisome position: 64.96

GC content: 65.73

Gene sequence:

>1593_bases
GTGAGCACCCTTTCTCCGCCCAAGGATCCGGCAGGGATCCCGACCGCTCAGGAGCGGGCTGCCGAGGGGGGAGAGCCGGC
ACTTCTGTCTGCCCCGTCAAGACTCCGGTGGGCTGGCTTAGCCCTTTCTCTCAGCTTAACGGGCCTGGTGTGGCTCCTGA
AGCTGGAGGCCGATCCCCACGCCGATGCCCTGGAAGAGTCGGGGCCGGCCCCCTCCGATGAGCCAGCCGAGCTAGAAAAT
CCAGATCCCTCGACCTTGGCTCCGGCGCGACGGGGCTACCCGAGGTGGGCCACCGGCCTCTTGCTCATGCTGGGCTTGGC
GGGGGTGGCCACGCTGCATCAACGCCAGCTTTCTCGTCACCCTTGGGGATCCCGGCTAGCGGAGCCGATTCCGCCCTCGG
TGCACACGCTGTCCGGCGCCCTGCAGCAGAACTACGAGCAAAAAAAAGCCCAACTGCGGCAAGCCTTCGAGGCGGGCCAG
ATCCCGACTGGGGAAGGGCCCCGAGGCATTCTCGAGCATGAGGTGCAGCCGGGGGAAACCCTCTGGCATCTGACCCAGAT
GTACCAGCTCGATGCCGCCGCCATCACTGTCTCCAACGGCATTCAAGCCAGTACGCCGCTGCGGCCAGGGCAGAAGCTGC
TGATCCCCAGCCAGCCGGGATTGATCTACAGCGTCAAGCCGGGAGATACACTGGAAGACATTGCCAACCGCTACCGGGTT
CCGCAGCAGCGGATCATCGAGGCAACTCCCCTGGATCGGCCTGAGTATCTGCGCATTGGCCAACGACTGCTCATCCCCGG
CGATGTGGGCGAGCTGATCCGGCGCGAGAACGAGATGCTCGCCCGCCGCGAGGCAGAAGAACGCCGCCGCCAGGAAGAGG
AAGCCCAGGAACAAGCTCGATTACAGGCCGAGCAGCAACGCCAGGCCCAGCAGATGCAGCAAGAACGACAGGCCCTCTTG
GCCGGTGGCTCGCTGGTCCACACGGTGGGAGCTGGCGACACCATCGAGCGGATTGCCGCTCGCTATGGGGTGACGCAGCG
GTCGATCATCCAGGCTAACCACTTGCGCAATCCCCACTGGCTACGCATTGGCCAACGCCTGACAATTCCGGCGCCTGGCA
CGCAGCCCGCCCCGCCGGCCCCCGGGCGACGAGCCCGGAGCCAATCCCAAGCTCGGCCAGCGCCGGCAGCTCCTCCTCCA
GCTCTTCCTCCGGCCCGCAGCAGTGGCTTCATCTGGCCGGTTGCGGGGCAAATCACCTCCGGCTTTGGCTACCGTCGCGG
TCGCTTCCATGCGGGGGTCGATATTCCCGGCCCGGTGGGATCCCCCATTGTAGCCGTTCAGGAGGGGGAGGTCATTTTTG
CCGGCAATGCCGGGGATGGCTACGGCAATCGCGTCGATATTCGCCATCCCAACGGGATCGTTACCCGCTACGCCCACGGT
CACCGGATCTATGTGTCCAAGGGCCAGTATGTGCAGCAGGGCCAGGTAATCATGAGCCGGGGCAATACGGGCCGCAGCAC
AGGGCCACACTTGCACTTTGAAGTCCGCCCCGGCGGGGGCGCGCCTGTGGATCCGCGGCCCTATCTGCCCTAA

Upstream 100 bases:

>100_bases
TTCTCTTTCACTCTAGTGTCAGCCTGTTGGTGTGAGGATGCCCCAAAGATTGACGTTCTCAGATGCCCAGGGGAGGGAGC
TGGACATCCATAGCGCTGCC

Downstream 100 bases:

>100_bases
ACACGTTTCAAACAAGAGGCTGCGCAGAACAGCCAGTCCCGGGCATAAATTGCTAGCCTAAAAAAGCAAACTCCAGACCG
TAGGAACACGCCGATGCAGT

Product: M23B family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSTLSPPKDPAGIPTAQERAAEGGEPALLSAPSRLRWAGLALSLSLTGLVWLLKLEADPHADALEESGPAPSDEPAELEN
PDPSTLAPARRGYPRWATGLLLMLGLAGVATLHQRQLSRHPWGSRLAEPIPPSVHTLSGALQQNYEQKKAQLRQAFEAGQ
IPTGEGPRGILEHEVQPGETLWHLTQMYQLDAAAITVSNGIQASTPLRPGQKLLIPSQPGLIYSVKPGDTLEDIANRYRV
PQQRIIEATPLDRPEYLRIGQRLLIPGDVGELIRRENEMLARREAEERRRQEEEAQEQARLQAEQQRQAQQMQQERQALL
AGGSLVHTVGAGDTIERIAARYGVTQRSIIQANHLRNPHWLRIGQRLTIPAPGTQPAPPAPGRRARSQSQARPAPAAPPP
ALPPARSSGFIWPVAGQITSGFGYRRGRFHAGVDIPGPVGSPIVAVQEGEVIFAGNAGDGYGNRVDIRHPNGIVTRYAHG
HRIYVSKGQYVQQGQVIMSRGNTGRSTGPHLHFEVRPGGGAPVDPRPYLP

Sequences:

>Translated_530_residues
MSTLSPPKDPAGIPTAQERAAEGGEPALLSAPSRLRWAGLALSLSLTGLVWLLKLEADPHADALEESGPAPSDEPAELEN
PDPSTLAPARRGYPRWATGLLLMLGLAGVATLHQRQLSRHPWGSRLAEPIPPSVHTLSGALQQNYEQKKAQLRQAFEAGQ
IPTGEGPRGILEHEVQPGETLWHLTQMYQLDAAAITVSNGIQASTPLRPGQKLLIPSQPGLIYSVKPGDTLEDIANRYRV
PQQRIIEATPLDRPEYLRIGQRLLIPGDVGELIRRENEMLARREAEERRRQEEEAQEQARLQAEQQRQAQQMQQERQALL
AGGSLVHTVGAGDTIERIAARYGVTQRSIIQANHLRNPHWLRIGQRLTIPAPGTQPAPPAPGRRARSQSQARPAPAAPPP
ALPPARSSGFIWPVAGQITSGFGYRRGRFHAGVDIPGPVGSPIVAVQEGEVIFAGNAGDGYGNRVDIRHPNGIVTRYAHG
HRIYVSKGQYVQQGQVIMSRGNTGRSTGPHLHFEVRPGGGAPVDPRPYLP
>Mature_529_residues
STLSPPKDPAGIPTAQERAAEGGEPALLSAPSRLRWAGLALSLSLTGLVWLLKLEADPHADALEESGPAPSDEPAELENP
DPSTLAPARRGYPRWATGLLLMLGLAGVATLHQRQLSRHPWGSRLAEPIPPSVHTLSGALQQNYEQKKAQLRQAFEAGQI
PTGEGPRGILEHEVQPGETLWHLTQMYQLDAAAITVSNGIQASTPLRPGQKLLIPSQPGLIYSVKPGDTLEDIANRYRVP
QQRIIEATPLDRPEYLRIGQRLLIPGDVGELIRRENEMLARREAEERRRQEEEAQEQARLQAEQQRQAQQMQQERQALLA
GGSLVHTVGAGDTIERIAARYGVTQRSIIQANHLRNPHWLRIGQRLTIPAPGTQPAPPAPGRRARSQSQARPAPAAPPPA
LPPARSSGFIWPVAGQITSGFGYRRGRFHAGVDIPGPVGSPIVAVQEGEVIFAGNAGDGYGNRVDIRHPNGIVTRYAHGH
RIYVSKGQYVQQGQVIMSRGNTGRSTGPHLHFEVRPGGGAPVDPRPYLP

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=206, Percent_Identity=31.5533980582524, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87081989, Length=310, Percent_Identity=31.6129032258064, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1789099, Length=262, Percent_Identity=29.7709923664122, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 57557; Mature: 57426

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLSPPKDPAGIPTAQERAAEGGEPALLSAPSRLRWAGLALSLSLTGLVWLLKLEADPH
CCCCCCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHHHEEEHHHHHCEEEEEEECCCCC
ADALEESGPAPSDEPAELENPDPSTLAPARRGYPRWATGLLLMLGLAGVATLHQRQLSRH
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PWGSRLAEPIPPSVHTLSGALQQNYEQKKAQLRQAFEAGQIPTGEGPRGILEHEVQPGET
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHH
LWHLTQMYQLDAAAITVSNGIQASTPLRPGQKLLIPSQPGLIYSVKPGDTLEDIANRYRV
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHCC
PQQRIIEATPLDRPEYLRIGQRLLIPGDVGELIRRENEMLARREAEERRRQEEEAQEQAR
CHHHHHCCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAEQQRQAQQMQQERQALLAGGSLVHTVGAGDTIERIAARYGVTQRSIIQANHLRNPHW
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCE
LRIGQRLTIPAPGTQPAPPAPGRRARSQSQARPAPAAPPPALPPARSSGFIWPVAGQITS
EEECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHC
GFGYRRGRFHAGVDIPGPVGSPIVAVQEGEVIFAGNAGDGYGNRVDIRHPNGIVTRYAHG
CCCCCCCCEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEEEECCCCCEEEEECC
HRIYVSKGQYVQQGQVIMSRGNTGRSTGPHLHFEVRPGGGAPVDPRPYLP
CEEEEECCCEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
STLSPPKDPAGIPTAQERAAEGGEPALLSAPSRLRWAGLALSLSLTGLVWLLKLEADPH
CCCCCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHHHEEEHHHHHCEEEEEEECCCCC
ADALEESGPAPSDEPAELENPDPSTLAPARRGYPRWATGLLLMLGLAGVATLHQRQLSRH
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PWGSRLAEPIPPSVHTLSGALQQNYEQKKAQLRQAFEAGQIPTGEGPRGILEHEVQPGET
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHH
LWHLTQMYQLDAAAITVSNGIQASTPLRPGQKLLIPSQPGLIYSVKPGDTLEDIANRYRV
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHCC
PQQRIIEATPLDRPEYLRIGQRLLIPGDVGELIRRENEMLARREAEERRRQEEEAQEQAR
CHHHHHCCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAEQQRQAQQMQQERQALLAGGSLVHTVGAGDTIERIAARYGVTQRSIIQANHLRNPHW
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCE
LRIGQRLTIPAPGTQPAPPAPGRRARSQSQARPAPAAPPPALPPARSSGFIWPVAGQITS
EEECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHC
GFGYRRGRFHAGVDIPGPVGSPIVAVQEGEVIFAGNAGDGYGNRVDIRHPNGIVTRYAHG
CCCCCCCCEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEEEECCCCCEEEEECC
HRIYVSKGQYVQQGQVIMSRGNTGRSTGPHLHFEVRPGGGAPVDPRPYLP
CEEEEECCCEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]