| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is murB
Identifier: 86606523
GI number: 86606523
Start: 1878066
End: 1879004
Strand: Reverse
Name: murB
Synonym: CYA_1875
Alternate gene names: 86606523
Gene position: 1879004-1878066 (Counterclockwise)
Preceding gene: 86606524
Following gene: 86606520
Centisome position: 64.07
GC content: 61.66
Gene sequence:
>939_bases ATGACTACAGCTCCCTGCGTGCCCAATGCCTCAAGCGTTGCCCGACTCTCTGGACGGATTCAAGCGGGGATCCCCTTGGC CCCTCTGACCACCTTTCGCGTGGGCGGCAAAGCGGAGTGGTATTGCGAGCCGCACAACAATCTGGAGCTGCAGCAATGTT TGGCCTGGGCGCGGGCGCAAGGGATCCCGGTTACACTGTTGGGGGCGGGCAGCAACCTGCTCATCAGCGATGCCGGCCTG CCGGGGCTGGTGATCCACACCCGGCGTTTGCGCGGGATGCAACTGTTGGAGGGGGGGAGGATCTGGGCCGCTGCCGGAGA ACCTTTGGTTAACCTGGCGCGGGCAGCCGCCAAGCGGGGCTGGAGTGGCTTGGAGTGGGCCATCGGGATCCCGGGCACGC TGGGGGGAGCGGTGGTGATGAATGCCGGCGCCCACGGGCGCGCCATGTCGGACGTGTTGGTGGAAGTGCAGATTTTGGAT GAAGAGCAGGAGCCCTGCCGCTTAGAACCGGTCGATCTGCAATTTGGCTACCGCCGCTCGCGGCTACAGGACTCTCCTTG GACGGTGACGGGGGCAACGCTGCAGTTACTCCCAGGCCGGGATCCGGCTCAGGTGCAGCGACAAACCCAGCGCCACCTCA ACCAGCGCCTGAGCTCTCAGCCCTATCATCTGCCCAGTTGTGGCAGCGTCTTTCGCAACCCCGAAACCCATCCTGCCGGC TGGCTAATTGAGCAGGTCGGTCTGAAGGGCTACCGGATTGGCGGGGCCCAGATCTCCGAGCGCCATGCAAACTTCATCCT CAATTGTGGTCAGGCCAGCGCCAACGACATCTACCGTCTGATTTGCTTGGCCCAAGAAAAGGTTTATCAACGATGGTCGA TATTCCTAGAGCCAGAAGTGCGCATTCTGGGATCTTTTGACGATCCTTTGATAAGTTAA
Upstream 100 bases:
>100_bases CTCGGCTGGGGGAGCAGCCTCTGGCAAACTTTGAAGGGAAATTGCCGGGGCAAGCGGAGGATGGGATCAGGGAGATGGGG GCTTCTGAGGTATTGGCATC
Downstream 100 bases:
>100_bases TTTGGCCTACCCCATTTTTTGATGATTGGATGGTTCTGATCTTGAACTGTCCTCACCAGTCCTTGATGGATTCTCGTTGA TTATTTTGCGTCAGTTTATG
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTAPCVPNASSVARLSGRIQAGIPLAPLTTFRVGGKAEWYCEPHNNLELQQCLAWARAQGIPVTLLGAGSNLLISDAGL PGLVIHTRRLRGMQLLEGGRIWAAAGEPLVNLARAAAKRGWSGLEWAIGIPGTLGGAVVMNAGAHGRAMSDVLVEVQILD EEQEPCRLEPVDLQFGYRRSRLQDSPWTVTGATLQLLPGRDPAQVQRQTQRHLNQRLSSQPYHLPSCGSVFRNPETHPAG WLIEQVGLKGYRIGGAQISERHANFILNCGQASANDIYRLICLAQEKVYQRWSIFLEPEVRILGSFDDPLIS
Sequences:
>Translated_312_residues MTTAPCVPNASSVARLSGRIQAGIPLAPLTTFRVGGKAEWYCEPHNNLELQQCLAWARAQGIPVTLLGAGSNLLISDAGL PGLVIHTRRLRGMQLLEGGRIWAAAGEPLVNLARAAAKRGWSGLEWAIGIPGTLGGAVVMNAGAHGRAMSDVLVEVQILD EEQEPCRLEPVDLQFGYRRSRLQDSPWTVTGATLQLLPGRDPAQVQRQTQRHLNQRLSSQPYHLPSCGSVFRNPETHPAG WLIEQVGLKGYRIGGAQISERHANFILNCGQASANDIYRLICLAQEKVYQRWSIFLEPEVRILGSFDDPLIS >Mature_311_residues TTAPCVPNASSVARLSGRIQAGIPLAPLTTFRVGGKAEWYCEPHNNLELQQCLAWARAQGIPVTLLGAGSNLLISDAGLP GLVIHTRRLRGMQLLEGGRIWAAAGEPLVNLARAAAKRGWSGLEWAIGIPGTLGGAVVMNAGAHGRAMSDVLVEVQILDE EQEPCRLEPVDLQFGYRRSRLQDSPWTVTGATLQLLPGRDPAQVQRQTQRHLNQRLSSQPYHLPSCGSVFRNPETHPAGW LIEQVGLKGYRIGGAQISERHANFILNCGQASANDIYRLICLAQEKVYQRWSIFLEPEVRILGSFDDPLIS
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=331, Percent_Identity=27.4924471299094, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_SYNJA (Q2JTH4)
Other databases:
- EMBL: CP000239 - RefSeq: YP_475286.1 - STRING: Q2JTH4 - GeneID: 3899853 - GenomeReviews: CP000239_GR - KEGG: cya:CYA_1875 - TIGR: CYA_1875 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: ISERHAN - ProtClustDB: PRK13905 - BioCyc: SSP321327:CYA_1875-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 34044; Mature: 33913
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 178-178 ACT_SITE 229-229 ACT_SITE 299-299
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPCVPNASSVARLSGRIQAGIPLAPLTTFRVGGKAEWYCEPHNNLELQQCLAWARAQ CCCCCCCCCHHHHHHHCCCEECCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHC GIPVTLLGAGSNLLISDAGLPGLVIHTRRLRGMQLLEGGRIWAAAGEPLVNLARAAAKRG CCCEEEEECCCCEEEECCCCCEEEEEHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHCC WSGLEWAIGIPGTLGGAVVMNAGAHGRAMSDVLVEVQILDEEQEPCRLEPVDLQFGYRRS CCCCEEEEECCCCCCCEEEEECCCCCCHHHHHEEEEEEECCCCCCCCCCEECCCCCCHHH RLQDSPWTVTGATLQLLPGRDPAQVQRQTQRHLNQRLSSQPYHLPSCGSVFRNPETHPAG HCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHH WLIEQVGLKGYRIGGAQISERHANFILNCGQASANDIYRLICLAQEKVYQRWSIFLEPEV HHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCE RILGSFDDPLIS EEEECCCCCCCC >Mature Secondary Structure TTAPCVPNASSVARLSGRIQAGIPLAPLTTFRVGGKAEWYCEPHNNLELQQCLAWARAQ CCCCCCCCHHHHHHHCCCEECCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHC GIPVTLLGAGSNLLISDAGLPGLVIHTRRLRGMQLLEGGRIWAAAGEPLVNLARAAAKRG CCCEEEEECCCCEEEECCCCCEEEEEHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHCC WSGLEWAIGIPGTLGGAVVMNAGAHGRAMSDVLVEVQILDEEQEPCRLEPVDLQFGYRRS CCCCEEEEECCCCCCCEEEEECCCCCCHHHHHEEEEEEECCCCCCCCCCEECCCCCCHHH RLQDSPWTVTGATLQLLPGRDPAQVQRQTQRHLNQRLSSQPYHLPSCGSVFRNPETHPAG HCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHH WLIEQVGLKGYRIGGAQISERHANFILNCGQASANDIYRLICLAQEKVYQRWSIFLEPEV HHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCE RILGSFDDPLIS EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA