| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is rimI
Identifier: 86606422
GI number: 86606422
Start: 1776482
End: 1777009
Strand: Reverse
Name: rimI
Synonym: CYA_1768
Alternate gene names: 86606422
Gene position: 1777009-1776482 (Counterclockwise)
Preceding gene: 86606423
Following gene: 86606421
Centisome position: 60.59
GC content: 62.88
Gene sequence:
>528_bases ATGAGCGGTACGAGTTATCGGCTGCAGGTGCTCGACCTCACCGCCCTGCCCCAATTGCTGGAGCTGGATCGCCGCTGCTA CGGCGGATACTGGGGAGAACAGGGCTATCGCGCGGAGCTGGAAAGACCCAGCAGCACGGTGATCGGGGTTGTGGCGGAAC CGGCTGCCGCTGGCGCTTCCTGTGGCTTGGGCCGAACGGAGTTCCCCCCTCCCTCTCCAGACCTCGCGACGCAAACGACC CAAGCGCTCGTGGGCTTTGGCATCCTCTGGCGCATCGAAGAAGAAGCCCACATTATCTCGTTGGCGGTGGATCCCGACCA TCGGCGGCGCGGCTTGGGCCGCAGGATCCTGGAGGAGCTGTTCAATCACGCTCGAGCCGCAGGCTGTCGCTGGGCCACGC TCGAGGTCAGAGCCTCTAACCACGCCGCCATCCACCTCTACGAATCGGCAGGGTTTCAATTGCTGGGACGCCGCAAGGGC TATTACAGCGGAGAAGATGCGCTGGTCTATTGGAAAAAGCCAATCTAG
Upstream 100 bases:
>100_bases AAGCCTTAGCCGCCGAGCCCTGCCCTATGCCGCCCCCGATGACGATCCCTTTGGGCAGTTGTTGCTGGCCGAGTTCTGCG AATTGCGGGACTAGACCACC
Downstream 100 bases:
>100_bases AAAAGCAACAACACTGAAAATTTGTGGAAGTTCGCAACCAGATCCCTAGACAAACCGGCAGCCAAGTCTGGCAATCCTAC AGAAGATCAATATCGACAGA
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSGTSYRLQVLDLTALPQLLELDRRCYGGYWGEQGYRAELERPSSTVIGVVAEPAAAGASCGLGRTEFPPPSPDLATQTT QALVGFGILWRIEEEAHIISLAVDPDHRRRGLGRRILEELFNHARAAGCRWATLEVRASNHAAIHLYESAGFQLLGRRKG YYSGEDALVYWKKPI
Sequences:
>Translated_175_residues MSGTSYRLQVLDLTALPQLLELDRRCYGGYWGEQGYRAELERPSSTVIGVVAEPAAAGASCGLGRTEFPPPSPDLATQTT QALVGFGILWRIEEEAHIISLAVDPDHRRRGLGRRILEELFNHARAAGCRWATLEVRASNHAAIHLYESAGFQLLGRRKG YYSGEDALVYWKKPI >Mature_174_residues SGTSYRLQVLDLTALPQLLELDRRCYGGYWGEQGYRAELERPSSTVIGVVAEPAAAGASCGLGRTEFPPPSPDLATQTTQ ALVGFGILWRIEEEAHIISLAVDPDHRRRGLGRRILEELFNHARAAGCRWATLEVRASNHAAIHLYESAGFQLLGRRKGY YSGEDALVYWKKPI
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=94, Percent_Identity=44.6808510638298, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 19395; Mature: 19264
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTSYRLQVLDLTALPQLLELDRRCYGGYWGEQGYRAELERPSSTVIGVVAEPAAAGAS CCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCC CGLGRTEFPPPSPDLATQTTQALVGFGILWRIEEEAHIISLAVDPDHRRRGLGRRILEEL CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHH FNHARAAGCRWATLEVRASNHAAIHLYESAGFQLLGRRKGYYSGEDALVYWKKPI HHHHHHCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCC >Mature Secondary Structure SGTSYRLQVLDLTALPQLLELDRRCYGGYWGEQGYRAELERPSSTVIGVVAEPAAAGAS CCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCC CGLGRTEFPPPSPDLATQTTQALVGFGILWRIEEEAHIISLAVDPDHRRRGLGRRILEEL CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHH FNHARAAGCRWATLEVRASNHAAIHLYESAGFQLLGRRKGYYSGEDALVYWKKPI HHHHHHCCCEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]