| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86606397
Identifier: 86606397
GI number: 86606397
Start: 1747942
End: 1748325
Strand: Reverse
Name: 86606397
Synonym: CYA_1742
Alternate gene names: NA
Gene position: 1748325-1747942 (Counterclockwise)
Preceding gene: 86606398
Following gene: 86606395
Centisome position: 59.61
GC content: 59.11
Gene sequence:
>384_bases ATGACCATTGAACCGAAAGCCCGTAAGAACCGCGAAAATGCCAACTCCCGTTCCCGCAGCCGTCGCCGTGAATCGGCCAA AGGGATCAAAGGGGCCAATCCAGCCGCCAGCCTCTCCCTGCCGAAGTTGATCCAAGAGAATGCTGTGCTCCAATCTCGCA GCCAGTTGTTGCTGATGTACAGCGACTTCCAAACCGAAATGCCCAACGACGGCAAAACCGGCGTTGGCACCTGGCTGCAG AACCGCCTCAAGGAGTACGGCATGCCCAGCCTGCTGCGTTTTGGCCCGCGCTCCTGCCCCCAGGTTTTCCGCCGCGATGA ATTTTCTGAGTGGATGACGCTAGCCCTCAATGCCGTCAGCCCCAAAGACGAGAGCGCCAGCTAG
Upstream 100 bases:
>100_bases TGGACTCATCGAGCTACCTTCCGCGGCGGGCTCTGTCCTCAGCCTGCGAGTTCCGGCTTTTACCCCTTTTGGGGAACCAC TCAGTCGTCTAGGAGATTCT
Downstream 100 bases:
>100_bases GAGAGGTAGACTCTCGTCGGGGCAGACCTGAACTACGCTGAAGAGACTGCGCCATTGGGTTCAGCCGGGAAAGTTCCTTC TGCCTGCTTCTCTCAACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTIEPKARKNRENANSRSRSRRRESAKGIKGANPAASLSLPKLIQENAVLQSRSQLLLMYSDFQTEMPNDGKTGVGTWLQ NRLKEYGMPSLLRFGPRSCPQVFRRDEFSEWMTLALNAVSPKDESAS
Sequences:
>Translated_127_residues MTIEPKARKNRENANSRSRSRRRESAKGIKGANPAASLSLPKLIQENAVLQSRSQLLLMYSDFQTEMPNDGKTGVGTWLQ NRLKEYGMPSLLRFGPRSCPQVFRRDEFSEWMTLALNAVSPKDESAS >Mature_126_residues TIEPKARKNRENANSRSRSRRRESAKGIKGANPAASLSLPKLIQENAVLQSRSQLLLMYSDFQTEMPNDGKTGVGTWLQN RLKEYGMPSLLRFGPRSCPQVFRRDEFSEWMTLALNAVSPKDESAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14330; Mature: 14199
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEPKARKNRENANSRSRSRRRESAKGIKGANPAASLSLPKLIQENAVLQSRSQLLLMY CCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHH SDFQTEMPNDGKTGVGTWLQNRLKEYGMPSLLRFGPRSCPQVFRRDEFSEWMTLALNAVS CCHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC PKDESAS CCCCCCC >Mature Secondary Structure TIEPKARKNRENANSRSRSRRRESAKGIKGANPAASLSLPKLIQENAVLQSRSQLLLMY CCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHH SDFQTEMPNDGKTGVGTWLQNRLKEYGMPSLLRFGPRSCPQVFRRDEFSEWMTLALNAVS CCHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC PKDESAS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA