Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606371

Identifier: 86606371

GI number: 86606371

Start: 1723211

End: 1723624

Strand: Reverse

Name: 86606371

Synonym: CYA_1716

Alternate gene names: NA

Gene position: 1723624-1723211 (Counterclockwise)

Preceding gene: 86606374

Following gene: 86606370

Centisome position: 58.77

GC content: 61.35

Gene sequence:

>414_bases
GTGATCAAACCCCACTCTGCCCATCTGTTGACCCCCGACTTCCGCCTCAGCTTGGCAGTGCTGGCTTTGGCGGTGCCGCT
GTTGTGGCTCTCGTTTTGGCTAGGGTTGGGAGTGGGGTTGTTTGGCCTGTTTTTGCTGGTACAGACCTGTCTGATCGGGC
TGGCCTTTACCCGCACGGCGCTGCAGGTCTACAGCGGCTCCCGGCGCATCCGCGAGTTCCCCTACAGCGAGTGGCAGGAC
TGGCAGATCTTCTGGCGGCCGGTGCCGATTTTGTTTTTCTTCCGAGAAAGCCGGAGCATTCACTTTTTGCCGATGCTCTT
CAACCCGGTCGAGCTGCGCATCTGCCTGGAGGAGCGGCTAGGCCACCTGCACGCCCGACGGCAGGGATCCCCTTTCCACC
CATCAGGCCGATGA

Upstream 100 bases:

>100_bases
TGTTTGGTATGCCCCCAACTTACCCAGAGTCGGGATCCCTCCGGAGAAAGGTAGTGGCAGCGGCGTAAAATGGAGCTGGC
AAGCGGAGGAGAAGCAAAAA

Downstream 100 bases:

>100_bases
GCGGTTCCGGGGGCTGGGTTTGGCAAGAGGCAGGGAGATGGCGTTGGCTGCAGTGTCAACTGCTGGCGGGGTGGCCCCAT
GCTTTTGGCTGTCGTCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTALQVYSGSRRIREFPYSEWQD
WQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERLGHLHARRQGSPFHPSGR

Sequences:

>Translated_137_residues
MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTALQVYSGSRRIREFPYSEWQD
WQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERLGHLHARRQGSPFHPSGR
>Mature_137_residues
MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTALQVYSGSRRIREFPYSEWQD
WQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERLGHLHARRQGSPFHPSGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15971; Mature: 15971

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTA
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVYSGSRRIREFPYSEWQDWQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERL
HHHHHCCHHHHHCCCCCCCCCEEEEECHHEEEEEECCCCEEEEHHHCCHHHHHHHHHHHH
GHLHARRQGSPFHPSGR
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTA
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVYSGSRRIREFPYSEWQDWQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERL
HHHHHCCHHHHHCCCCCCCCCEEEEECHHEEEEEECCCCEEEEHHHCCHHHHHHHHHHHH
GHLHARRQGSPFHPSGR
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA