Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606369

Identifier: 86606369

GI number: 86606369

Start: 1721996

End: 1722337

Strand: Reverse

Name: 86606369

Synonym: CYA_1714

Alternate gene names: NA

Gene position: 1722337-1721996 (Counterclockwise)

Preceding gene: 86606370

Following gene: 86606368

Centisome position: 58.73

GC content: 59.36

Gene sequence:

>342_bases
ATGCTTTGCCGGCTTGCCCTTCGGGGGTTGGTTTGGGTGGCTTTGTCTTTCCCTTTTGCCTTTGTCGGAGAAGCCCCTGC
CCAGACCTCTCTGACGGGCATCAACCGCGACAACGTACTGCAACTGAACATCGGGCCCGGACGCCGCCTGGCTCCAGGGC
CCGCAAAGGGTTCCGGCTCCGAGCAAGGCCAGGATCCCACCGTTCCCTCGGCGCTGATGTGGGCAGAGTGGCATATCCGC
GCCAATGTTTGTACCGGCAACCTATCTGCCGAAGAATTGGCGGAGCTGTTTCCCTTGGTCAACCAAGAGTTAGTAGATGC
CGTTTGTCAAGGGGGAAGTTAG

Upstream 100 bases:

>100_bases
ATTGGCCTGCCAAAGGCGGCTTTTGACAAATCCTAGCTGCCAAAAATAGCAGCTATAATTGCCCTCAAAACTCAACCCTA
TCTCGCGGGGGAGGGATCCC

Downstream 100 bases:

>100_bases
CCGGCTTGCCCAGGCAAGCGGTAAGGTGAAAAGAAAGCTCTCAGGTTGCTGCTGCATGGATTTTGAGAAGCTCTTGGAGG
AATGGGTGGCAGCCTTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGSEQGQDPTVPSALMWAEWHIR
ANVCTGNLSAEELAELFPLVNQELVDAVCQGGS

Sequences:

>Translated_113_residues
MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGSEQGQDPTVPSALMWAEWHIR
ANVCTGNLSAEELAELFPLVNQELVDAVCQGGS
>Mature_113_residues
MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGSEQGQDPTVPSALMWAEWHIR
ANVCTGNLSAEELAELFPLVNQELVDAVCQGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11971; Mature: 11971

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGS
CHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
EQGQDPTVPSALMWAEWHIRANVCTGNLSAEELAELFPLVNQELVDAVCQGGS
CCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGS
CHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
EQGQDPTVPSALMWAEWHIRANVCTGNLSAEELAELFPLVNQELVDAVCQGGS
CCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA