| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606369
Identifier: 86606369
GI number: 86606369
Start: 1721996
End: 1722337
Strand: Reverse
Name: 86606369
Synonym: CYA_1714
Alternate gene names: NA
Gene position: 1722337-1721996 (Counterclockwise)
Preceding gene: 86606370
Following gene: 86606368
Centisome position: 58.73
GC content: 59.36
Gene sequence:
>342_bases ATGCTTTGCCGGCTTGCCCTTCGGGGGTTGGTTTGGGTGGCTTTGTCTTTCCCTTTTGCCTTTGTCGGAGAAGCCCCTGC CCAGACCTCTCTGACGGGCATCAACCGCGACAACGTACTGCAACTGAACATCGGGCCCGGACGCCGCCTGGCTCCAGGGC CCGCAAAGGGTTCCGGCTCCGAGCAAGGCCAGGATCCCACCGTTCCCTCGGCGCTGATGTGGGCAGAGTGGCATATCCGC GCCAATGTTTGTACCGGCAACCTATCTGCCGAAGAATTGGCGGAGCTGTTTCCCTTGGTCAACCAAGAGTTAGTAGATGC CGTTTGTCAAGGGGGAAGTTAG
Upstream 100 bases:
>100_bases ATTGGCCTGCCAAAGGCGGCTTTTGACAAATCCTAGCTGCCAAAAATAGCAGCTATAATTGCCCTCAAAACTCAACCCTA TCTCGCGGGGGAGGGATCCC
Downstream 100 bases:
>100_bases CCGGCTTGCCCAGGCAAGCGGTAAGGTGAAAAGAAAGCTCTCAGGTTGCTGCTGCATGGATTTTGAGAAGCTCTTGGAGG AATGGGTGGCAGCCTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGSEQGQDPTVPSALMWAEWHIR ANVCTGNLSAEELAELFPLVNQELVDAVCQGGS
Sequences:
>Translated_113_residues MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGSEQGQDPTVPSALMWAEWHIR ANVCTGNLSAEELAELFPLVNQELVDAVCQGGS >Mature_113_residues MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGSEQGQDPTVPSALMWAEWHIR ANVCTGNLSAEELAELFPLVNQELVDAVCQGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11971; Mature: 11971
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGS CHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC EQGQDPTVPSALMWAEWHIRANVCTGNLSAEELAELFPLVNQELVDAVCQGGS CCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MLCRLALRGLVWVALSFPFAFVGEAPAQTSLTGINRDNVLQLNIGPGRRLAPGPAKGSGS CHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC EQGQDPTVPSALMWAEWHIRANVCTGNLSAEELAELFPLVNQELVDAVCQGGS CCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA