| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606243
Identifier: 86606243
GI number: 86606243
Start: 1589713
End: 1589835
Strand: Reverse
Name: 86606243
Synonym: CYA_1580
Alternate gene names: NA
Gene position: 1589835-1589713 (Counterclockwise)
Preceding gene: 86606244
Following gene: 90296796
Centisome position: 54.21
GC content: 54.47
Gene sequence:
>123_bases ATGTCTTACGCCAAGACGATTGTCTGTTTCGCCAACTCCAGAAAAATGGCCGGTCGCTGTATTGCCGGCAAGGAATGGCA GAACGGAGAGCCGGGGGAATGGATGCGTCTCATGAGGCTCTAG
Upstream 100 bases:
>100_bases TTTGATCCCCTTTCGCCCTGAAGAACGGATTTGACTACTGGACTTTCAAGAAGCCGAAAATTACTCCCATTGAGCCTTTG CCCTTGCCCCAGAAGCCTGT
Downstream 100 bases:
>100_bases AATCTCGTCTTCTTGCCCTTTGCAAACTTCCAGAGGGGGACTTGTTTAGAAGTCGGGAAGAGTTTATAGCCGAAGCCTAT CTCATTCAAGGCAGGCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MSYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL
Sequences:
>Translated_40_residues MSYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL >Mature_39_residues SYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4622; Mature: 4490
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 15.0 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL CCCCCEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure SYAKTIVCFANSRKMAGRCIAGKEWQNGEPGEWMRLMRL CCCCEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA