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The map label for this gene is ctaC

Identifier: 86606180

GI number: 86606180

Start: 1522833

End: 1523861

Strand: Reverse

Name: ctaC

Synonym: CYA_1514

Alternate gene names: 86606180

Gene position: 1523861-1522833 (Counterclockwise)

Preceding gene: 86606184

Following gene: 86606179

Centisome position: 51.96

GC content: 60.54

Gene sequence:

>1029_bases
GTGAGTGCGCTCAGTAACATCATTTTGGTGGGTATTGGGGTTCTGCTGACCCTGGCCAGCCTCTGGTATGGCCAGAATCA
CCATCTGCTTCCCGAAGCAGCGGCCAACTCGGCTCCTCTGTTCGATAGCCTCTTCAACAGCACGATCACCATCGCCACGG
GGATCTTTTTGGTGGTGGAGGGGGTGCTTCTCTACTGTGCCATCCGTTACCGCAAGCGGCGGGGCGACCGTGGGGATGGG
GATCCCAACCACGGCAACGTGCTGCTGGAGATCGTCTGGACAGCGGTGCCAGCAGTGATCATCCTCTGGCTGGGCCTGGC
CAGCCTCGATGTCTATCAGGCGGTGTATGGGGGCGCCGATGTGGGCGGTCACATCCACACGGCCATGGCGATGGAGCCCT
CCCAAGACTCAGCAGCAGGGGATCCGGACTATGCCTACACTCCCGCGCTGCTGCCCGGAAAGGAGATGGGCCAGCCGGAG
CTGGTTGTCCAAGTTCAGGGCATGCAATATGCTTGGGTATTCACTTATCCGGAGTCGGGTTTGGTGGCTGGCGAGCTGCA
CCTTCCTCTTAACAAGCGGGTGCGCCTTAATATGACGGCTCTGGATGTCAACCACGCCTTCTGGGTGCCGCAATTTCGCC
TCAAGCAAGATCTCATTCCGGGCCGAGAAACCCACTTGGAGTTTGTGCCCACGCAGTTGGGAACTTACCCCATCGTCTGC
GCCGAGTTGTGTGGCCCTTACCATGGGGTGATGGCCGGGCAACTAATTGTGGAGACGCCGGAAGAGTTCGAGCGCTGGCA
GCAGGAGCAAGTTTTGGCCGCCGGTGGAGAGGGTGGCGCCCTTGCCCTGGCGGCGGACTCGCCGTCACTGCCTCTCCAGC
ACGGGCATCGTCTGGAATTTTCTCCGTCGGAGTCTGCCTTTGTCCAAGTTCACCGGCAACGTTTGGGCCTCTCGCCGGCT
GAGCTGGCCTCTCTCCAACTCCCCCTTGACGCACATTCTGGTGACGCCAGTAGGAGCTTCTTGCCATGA

Upstream 100 bases:

>100_bases
ATGGATATGAAGGATGGGTGTGGCCCGCTTCGGCTCTGTTCGCAGAACAGATTTTGTCTAGGGCGGGCGTGCCTTGCATT
TGCAGTGGGGAAGAGCAGTC

Downstream 100 bases:

>100_bases
CCCAGCTACAGGACAATCCCACCCTTGCCGCTGCCCCCAAAGCCAGCCTGGATCCTCCCGCCGAGCCTTGGTGGCGCTTT
TTTACCTTCTCCACCGATCA

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSALSNIILVGIGVLLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVEGVLLYCAIRYRKRRGDRGDG
DPNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGADVGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPE
LVVQVQGMQYAWVFTYPESGLVAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVC
AELCGPYHGVMAGQLIVETPEEFERWQQEQVLAAGGEGGALALAADSPSLPLQHGHRLEFSPSESAFVQVHRQRLGLSPA
ELASLQLPLDAHSGDASRSFLP

Sequences:

>Translated_342_residues
MSALSNIILVGIGVLLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVEGVLLYCAIRYRKRRGDRGDG
DPNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGADVGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPE
LVVQVQGMQYAWVFTYPESGLVAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVC
AELCGPYHGVMAGQLIVETPEEFERWQQEQVLAAGGEGGALALAADSPSLPLQHGHRLEFSPSESAFVQVHRQRLGLSPA
ELASLQLPLDAHSGDASRSFLP
>Mature_341_residues
SALSNIILVGIGVLLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVEGVLLYCAIRYRKRRGDRGDGD
PNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGADVGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPEL
VVQVQGMQYAWVFTYPESGLVAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVCA
ELCGPYHGVMAGQLIVETPEEFERWQQEQVLAAGGEGGALALAADSPSLPLQHGHRLEFSPSESAFVQVHRQRLGLSPAE
LASLQLPLDAHSGDASRSFLP

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 37040; Mature: 36909

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALSNIILVGIGVLLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHCCHHHHHHHHHHHHH
GVLLYCAIRYRKRRGDRGDGDPNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGAD
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPELVVQVQGMQYAWVFTYPESG
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCC
LVAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVC
EEEEEEECCCCCCEEEEEEEEECCCEEECCCHHHHHHCCCCCCCCEEEECHHHCCHHHHH
AELCGPYHGVMAGQLIVETPEEFERWQQEQVLAAGGEGGALALAADSPSLPLQHGHRLEF
HHHCCCHHHHHHCEEEEECCHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCEEEC
SPSESAFVQVHRQRLGLSPAELASLQLPLDAHSGDASRSFLP
CCCHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SALSNIILVGIGVLLTLASLWYGQNHHLLPEAAANSAPLFDSLFNSTITIATGIFLVVE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHCCHHHHHHHHHHHHH
GVLLYCAIRYRKRRGDRGDGDPNHGNVLLEIVWTAVPAVIILWLGLASLDVYQAVYGGAD
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VGGHIHTAMAMEPSQDSAAGDPDYAYTPALLPGKEMGQPELVVQVQGMQYAWVFTYPESG
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCC
LVAGELHLPLNKRVRLNMTALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVC
EEEEEEECCCCCCEEEEEEEEECCCEEECCCHHHHHHCCCCCCCCEEEECHHHCCHHHHH
AELCGPYHGVMAGQLIVETPEEFERWQQEQVLAAGGEGGALALAADSPSLPLQHGHRLEF
HHHCCCHHHHHHCEEEEECCHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCEEEC
SPSESAFVQVHRQRLGLSPAELASLQLPLDAHSGDASRSFLP
CCCHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659815; 8399373 [H]