| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86606176
Identifier: 86606176
GI number: 86606176
Start: 1518855
End: 1519064
Strand: Reverse
Name: 86606176
Synonym: CYA_1510
Alternate gene names: NA
Gene position: 1519064-1518855 (Counterclockwise)
Preceding gene: 86606178
Following gene: 86606175
Centisome position: 51.8
GC content: 53.33
Gene sequence:
>210_bases ATGGACACCATTGGCGAACTGGAGTTCAAGGTGCAGGTTTTAGCCCGCTGCCTGGGATCTGCTCTGGGTTTAGGCCGGCC TATTCGTGTGCAAATTCATTATTGTAATCCCCAAGTCTTCAATGCAGGCCAGTTGGGAGCAGGGGTTTCCCCTTTCAACT CTGAAGAGGTTGGGAAATCCCAGCCCCACCCGCTAGCCTCGTTTGCCTAA
Upstream 100 bases:
>100_bases TGATCTAGCTTGGCAAATTCTGTATTCCCACTGAAGAACTATCATCAATCTTCTCCTAAGCTGGGCTTAGAGACGGGGTT GGAGGGAGGGCTGCAAGCGT
Downstream 100 bases:
>100_bases AGGGCGCTTCGAGGTCGGCGAGGCAGCTAACTCTAGCAATGAGTCTGCGAGTTCTAGAAGGGGGATCCCGCTTGCCTTCC CGCCCTTGCCCCTGTTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MDTIGELEFKVQVLARCLGSALGLGRPIRVQIHYCNPQVFNAGQLGAGVSPFNSEEVGKSQPHPLASFA
Sequences:
>Translated_69_residues MDTIGELEFKVQVLARCLGSALGLGRPIRVQIHYCNPQVFNAGQLGAGVSPFNSEEVGKSQPHPLASFA >Mature_69_residues MDTIGELEFKVQVLARCLGSALGLGRPIRVQIHYCNPQVFNAGQLGAGVSPFNSEEVGKSQPHPLASFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7353; Mature: 7353
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIGELEFKVQVLARCLGSALGLGRPIRVQIHYCNPQVFNAGQLGAGVSPFNSEEVGKS CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCC QPHPLASFA CCCCCCCCC >Mature Secondary Structure MDTIGELEFKVQVLARCLGSALGLGRPIRVQIHYCNPQVFNAGQLGAGVSPFNSEEVGKS CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCC QPHPLASFA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA