Click here to switch to the map view.

The map label for this gene is 86606175

Identifier: 86606175

GI number: 86606175

Start: 1517279

End: 1518694

Strand: Reverse

Name: 86606175

Synonym: CYA_1509

Alternate gene names: NA

Gene position: 1518694-1517279 (Counterclockwise)

Preceding gene: 86606176

Following gene: 86606174

Centisome position: 51.78

GC content: 61.3

Gene sequence:

>1416_bases
ATGGAACGAGCAACGCGACTGTGGCGCGGCCTGCTGCTGCGGGATTTTCCTATCGAGTCCTGGTGGCAGGGCAGCCTTTT
AAGCCGAGTGTCGGGATCCCTGCGGAGTTGGGGCAAAAGCAGCCTACTGGTGCAAACCTCTGACTGGATCGGTTTGGGCC
TGGTGCTGCTGTATTGGGTCTTTTCGGCGCAAAGCTCCACCGGCATCCTAGGTCTGATTTTGCTGGCCATGGCGGCGCTT
GTGGTCTTGGGCTGGCTGGTGGAAACCCCAACTTGGCTGCCCGTCCATCTGCCCCTAGGCCTGTTTTGGGGAATTGCCAC
CCTGGCCACGATCCTTTCGCCGGTTCCCTATGCAGCGCGGGAGGGCTGGCTGAAGTTGACGCTCTACCTGGCCGGCTATC
TGCTGCTGCAGCGTCTGCTTCGCCAACTGCAGTTTCGGGATTGGATCGTCGGATCCCTGCTTTTGGTCAGCTTGGCGATG
GGGGTCTATGGCCTGCGGCAATACTTTTACGGGGCTGCCGAGCTGGCCACCTGGGTGGATCCGGAGTCGGGTTTGGCGGG
TCTGACGCGGGTGTACAGCTATCTGCGCAATCCAAATCTGTATGGGGGCTACTTGATCCCGGTCATTCCTCTGGGGCTGG
CCGCCACTTGGATTTGGCCCAGTTGGGGGGCGAAACTCCTGGCCGGGTTTACGACGGCGGTGAACCTGATTTGCCTGTTG
CTCACCTACAGTCGTGGCGCCTGGATTGGGGGGCTGGCCACGCTCACCCTGATGGCCGTGCTGTTGGCACAGTGGCATTC
TGTCGATTTGCCAGCCCGCTGGCGGCGTTGGGCCTTGCCGGCCCTGTTGGGCGGAGGGGGGGCTGCTCTGTTGCTCGGGA
TCCTGACGGTACGCTCCCTGCGGCTGCGGGTGCAGAGCCTTTTTTGGGGGCGGCTAGACACCAGCAACAACTTTCGGATC
AACGTCTGGGCGGCGGTCTTGGACATGATCCGCGACTTTCCCATCTTGGGGATCGGCCCCGGTAATGTCGCCTTTAACCG
CGTCTACCCCCTTTACCAACGAGGCAACTTCAGCGCCCTCGGAGCCTATTCGGTGCCTCTGCAGCTCACCGTGGAGACTG
GCTTCATCGGCTCCTTAACTTTCGCCTGGTTCCTCTTGGTGCTCTGGGATCACGGCTGGAGATGCTGGAAAACTTTGCTC
AACTTGCGGGATCCCCAGGGTCTGTGGGTGGCAGCGGGCTTGGCCGCTTGCACCGGCATGATGGTCCACGGCTTGGTGGA
TACCATCTGGTATCGTCCACAGGTACAAATGCTGTGGTGGCTTGCGGTAGCGCTCATTACAGCCAGCTTGGCCTCTCTTA
GCCCTCAGCCGCCCGTGGATGTTGGTGAGCCCCCATCGGAGGCTTCCTCCCGTTAG

Upstream 100 bases:

>100_bases
GGGGATCCCGCTTGCCTTCCCGCCCTTGCCCCTGTTCGCTGGGGAGATAAACTCGGAAGATAGGCCTGAAGCACAAGTGC
CCAGGGCGCTGGAAGGAGCC

Downstream 100 bases:

>100_bases
GGTAGCTTAAGCTTGACCTTCCAGTCTTGACGGGAGCCAACCCAGAGTGGTAAGCATCTTCAGTAGGAGATAAAAAATGT
ATCCGTTTTTACAATTCACA

Product: inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein

Products: NA

Alternate protein names: O-Antigen Polymerase; Inorganic Carbon Transporter; O-Antigen Polymerase Family; Heptosyltransferase Family; IctB Family Bicarbonate Transporter; Integral Membrane Protein; Bicarbonate Transporter ICT Family Protein

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MERATRLWRGLLLRDFPIESWWQGSLLSRVSGSLRSWGKSSLLVQTSDWIGLGLVLLYWVFSAQSSTGILGLILLAMAAL
VVLGWLVETPTWLPVHLPLGLFWGIATLATILSPVPYAAREGWLKLTLYLAGYLLLQRLLRQLQFRDWIVGSLLLVSLAM
GVYGLRQYFYGAAELATWVDPESGLAGLTRVYSYLRNPNLYGGYLIPVIPLGLAATWIWPSWGAKLLAGFTTAVNLICLL
LTYSRGAWIGGLATLTLMAVLLAQWHSVDLPARWRRWALPALLGGGGAALLLGILTVRSLRLRVQSLFWGRLDTSNNFRI
NVWAAVLDMIRDFPILGIGPGNVAFNRVYPLYQRGNFSALGAYSVPLQLTVETGFIGSLTFAWFLLVLWDHGWRCWKTLL
NLRDPQGLWVAAGLAACTGMMVHGLVDTIWYRPQVQMLWWLAVALITASLASLSPQPPVDVGEPPSEASSR

Sequences:

>Translated_471_residues
MERATRLWRGLLLRDFPIESWWQGSLLSRVSGSLRSWGKSSLLVQTSDWIGLGLVLLYWVFSAQSSTGILGLILLAMAAL
VVLGWLVETPTWLPVHLPLGLFWGIATLATILSPVPYAAREGWLKLTLYLAGYLLLQRLLRQLQFRDWIVGSLLLVSLAM
GVYGLRQYFYGAAELATWVDPESGLAGLTRVYSYLRNPNLYGGYLIPVIPLGLAATWIWPSWGAKLLAGFTTAVNLICLL
LTYSRGAWIGGLATLTLMAVLLAQWHSVDLPARWRRWALPALLGGGGAALLLGILTVRSLRLRVQSLFWGRLDTSNNFRI
NVWAAVLDMIRDFPILGIGPGNVAFNRVYPLYQRGNFSALGAYSVPLQLTVETGFIGSLTFAWFLLVLWDHGWRCWKTLL
NLRDPQGLWVAAGLAACTGMMVHGLVDTIWYRPQVQMLWWLAVALITASLASLSPQPPVDVGEPPSEASSR
>Mature_471_residues
MERATRLWRGLLLRDFPIESWWQGSLLSRVSGSLRSWGKSSLLVQTSDWIGLGLVLLYWVFSAQSSTGILGLILLAMAAL
VVLGWLVETPTWLPVHLPLGLFWGIATLATILSPVPYAAREGWLKLTLYLAGYLLLQRLLRQLQFRDWIVGSLLLVSLAM
GVYGLRQYFYGAAELATWVDPESGLAGLTRVYSYLRNPNLYGGYLIPVIPLGLAATWIWPSWGAKLLAGFTTAVNLICLL
LTYSRGAWIGGLATLTLMAVLLAQWHSVDLPARWRRWALPALLGGGGAALLLGILTVRSLRLRVQSLFWGRLDTSNNFRI
NVWAAVLDMIRDFPILGIGPGNVAFNRVYPLYQRGNFSALGAYSVPLQLTVETGFIGSLTFAWFLLVLWDHGWRCWKTLL
NLRDPQGLWVAAGLAACTGMMVHGLVDTIWYRPQVQMLWWLAVALITASLASLSPQPPVDVGEPPSEASSR

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52200; Mature: 52200

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERATRLWRGLLLRDFPIESWWQGSLLSRVSGSLRSWGKSSLLVQTSDWIGLGLVLLYWV
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
FSAQSSTGILGLILLAMAALVVLGWLVETPTWLPVHLPLGLFWGIATLATILSPVPYAAR
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHH
EGWLKLTLYLAGYLLLQRLLRQLQFRDWIVGSLLLVSLAMGVYGLRQYFYGAAELATWVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PESGLAGLTRVYSYLRNPNLYGGYLIPVIPLGLAATWIWPSWGAKLLAGFTTAVNLICLL
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LTYSRGAWIGGLATLTLMAVLLAQWHSVDLPARWRRWALPALLGGGGAALLLGILTVRSL
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RLRVQSLFWGRLDTSNNFRINVWAAVLDMIRDFPILGIGPGNVAFNRVYPLYQRGNFSAL
HHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCEEEECCCCCHHHCCCHHHCCCCCCEE
GAYSVPLQLTVETGFIGSLTFAWFLLVLWDHGWRCWKTLLNLRDPQGLWVAAGLAACTGM
CEEECCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
MVHGLVDTIWYRPQVQMLWWLAVALITASLASLSPQPPVDVGEPPSEASSR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MERATRLWRGLLLRDFPIESWWQGSLLSRVSGSLRSWGKSSLLVQTSDWIGLGLVLLYWV
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
FSAQSSTGILGLILLAMAALVVLGWLVETPTWLPVHLPLGLFWGIATLATILSPVPYAAR
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHH
EGWLKLTLYLAGYLLLQRLLRQLQFRDWIVGSLLLVSLAMGVYGLRQYFYGAAELATWVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PESGLAGLTRVYSYLRNPNLYGGYLIPVIPLGLAATWIWPSWGAKLLAGFTTAVNLICLL
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LTYSRGAWIGGLATLTLMAVLLAQWHSVDLPARWRRWALPALLGGGGAALLLGILTVRSL
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RLRVQSLFWGRLDTSNNFRINVWAAVLDMIRDFPILGIGPGNVAFNRVYPLYQRGNFSAL
HHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCEEEECCCCCHHHCCCHHHCCCCCCEE
GAYSVPLQLTVETGFIGSLTFAWFLLVLWDHGWRCWKTLLNLRDPQGLWVAAGLAACTGM
CEEECCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
MVHGLVDTIWYRPQVQMLWWLAVALITASLASLSPQPPVDVGEPPSEASSR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA