| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606164
Identifier: 86606164
GI number: 86606164
Start: 1505724
End: 1508000
Strand: Reverse
Name: 86606164
Synonym: CYA_1497
Alternate gene names: NA
Gene position: 1508000-1505724 (Counterclockwise)
Preceding gene: 86606165
Following gene: 86606163
Centisome position: 51.42
GC content: 64.43
Gene sequence:
>2277_bases GTGGTTTTGCTGGTTGGCCTCACGTTGTTCGGCAGCGCCTTTTGCCTTTTTTGGGGGCAGTTGTTGGTGGGCAAATTGCT GCTGCCGCTCTGGGGGGGATCCCCCCTGGTTTGGAATACCTGCCTGGTCTTTTTCCAGCTCGCTTTGCTGCTGGGCTACC TGTGGGCAGACCGGCTGGGGCGAGGGCTCGCTCCCGGCTGGGGCGTGCTGCTGCACGGGATCCTCCTGCTGGCGGGGCTG AAGTTTTTGCCCTTTCAGTTTGGGATCCCTGGCCAACTGGAAGGGGTCTTCCCTTCCCTAGCTCTGTTGGCTGACTTGAC AGCAAGGGCGGGAGTACCCTTGCTTCTCCTGTCGGGGACGACGCCGTTGCTGCAGCGGGCGCTGGGAGAGGCGAAAAGGG ATCCCTACGGGCTCTACGTGGCCAGCAATGCCGGCAGCCTAGCGGGGCTGCTGGGCTATCCGCTGCTCTTGGAGCCGCGG TTGTCTCTGTCGGGGCAAACCCACCTGTGGACGGGATCCTACGCTCTGGTCGCAGCGCTGGTGCTGCTGGGTGGGGTGGG GCTCATGCTGAACGGGCGGGAGGTGACTTTCCCGAGGGGAGATCCCGTGGAGGAGATCCCCCCCGTCTCCTGGCGGGAGC GTTGGCGCTGGGCCGGCTGGGCCTTTTTGCCGGCGGGCCTGTTGGTGGCGGCCACCACCCTCTTGACCACCGACGTGGCG GCGGTGCCCCTGCTGTGGGCCGTTCCCCTGAGCCTTTACCTCATGACCTTCATACTGGCCTTCGGCGGCCTCTACCCCAA TGACTTGGCTTTAGGGACAACGGCTCTGCTGGCCTGTGGAGCGCTAGGGGCCCAGGTTCTGGGCTGGGCGAGACCTTGGT TTTGGGTGTTGCCGCTACATCTGGGGGCTTTTGGCCTGGTGAGCTGGGCCTGTCACAGTCAGTTGGCCAGATCCCGTCCA CCCGCCCAGCAGTTGACGCAGTTTTACCTGTGGCTGGCTGTGGGAGGCAGCTTGGGAGGGCTGTTCTCCGCTTTGCTGGC GCCGCAGATGTTTGAGACCTTACTGGAGTACCCCCTGCTCTTGGGGGTGTCGCTGGCGGCCTTAGCGGCACGGGGAGGGC GGCTGGGCCTGTCGCTAGGGCTGGGGTTGCTCTTGCCTTTGTTGCTGTTGGGCTTTCGTCCTCAGGCGCTCTTTCGCCTT GGAGCCGCTGGGGGCTTGGCTCTGGGGATGGCCCTTCTGGGGTCTGTAGGAGAAGGCAGCAGAAGGCGCTGGGTGGGAAC AGGGATGGGTCTAGTGTTGCTGCTAGGACAAACCTGGCTGCCGCCGGGGCTCCAGGTGGTGGCCGAGGAGCGCAGCGCCT TTGGCCTCCACCGGATTGTGGAATACCACGCTGAGGACGGATCCTTCCGCAGCCTGCTCCACGGCACCACCCTGCACGGC AGCCAAAACCTGGATCCCCAAAAGGCCCTGGAGCCGCTCACCTATTTTTCCCGCGAGGGGCCGGTGGGTCAGGTGTTCCA GCGGTGGCGGGCGCAGCCGCCCTCTTCTCCGGCCCAGGTGGCGGTGCTGGGGCTGGGGATCGGCACCTTGGCCGCCTACG CCGAGCCAGGGGATGAGTGGACGTTTTTCGAGTTGGATCCCACCGTGGCCGACTGGGCGGGCCGCTACTTCCCCTATCTC GATTGGGCCAGCCGGCGGGCGCAGGTGCGGGTAATCCTGGGCGATGCCCGCCTCCGCCTGCAAGGGATCCCCGATGGCAG CTACGACCTGATGGTGATAGATGCCTTCAGCTCCGACGCCGTGCCGGTGCATCTGCTTACCCAGGAGGCCCTGACCCTCT ACCTCCGCAAGCTCAAGCCCCAGGGCTGGCTGCTCTTTAACATCACCAACCGCCACCTGGACTTGGCGCCAGTGCTGGCC GCCTTGGCAAGAGCATTGCGGCTTCCCGCCTGGCAGCAAGCCCATGAAGAGCTCACCGCCGCCCAGCGCCGGGCAGGGCT AGCCCCTTCCCACTGGGTGCTGATGGCCAAAAGCCCTGGTGGCCGGCAAGACTGGGATCCCTGGCAGCCCCTTTTGCCCC AAGCTGGGGATCCCCTCTGGCGAGATGATTTTTCCAACCTGCTACATGTAATCCGCTGGCCCCAGCTTCCCCTGCTGGGA GATATCCAGATCCCAGCTCCGAAGCAGAATCCGGCTGTTATCGCTGCGCGACGCTTCGGCAATGCGTCAGCCTTATTCAG CAAGACGGCTAAAGAAATCTTTACAATGCAGATTTAG
Upstream 100 bases:
>100_bases TTGGGCGGGCGGAGGTTCGCGGCTGCTGGGATCCGCCCCTGAATCCAGCACCGGCATCCAAGCTTCTTAGAACTGACAGC CAGGGGTTGGGGGCACGGCT
Downstream 100 bases:
>100_bases TATGAGTTATGATTGTTTGAAGCATAACTAATGTCTGCTCAGGAGCCTGGCTTATGTCTCCTTCAACCCTGCAAGCCCCT ACTGTCGATTGGCAAGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Spermine/Spermidine Synthase Protein; Integral Membrane Protein-Like; Ferrichrome ABC Transporter Permease; Integral Membrane Protein
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MVLLVGLTLFGSAFCLFWGQLLVGKLLLPLWGGSPLVWNTCLVFFQLALLLGYLWADRLGRGLAPGWGVLLHGILLLAGL KFLPFQFGIPGQLEGVFPSLALLADLTARAGVPLLLLSGTTPLLQRALGEAKRDPYGLYVASNAGSLAGLLGYPLLLEPR LSLSGQTHLWTGSYALVAALVLLGGVGLMLNGREVTFPRGDPVEEIPPVSWRERWRWAGWAFLPAGLLVAATTLLTTDVA AVPLLWAVPLSLYLMTFILAFGGLYPNDLALGTTALLACGALGAQVLGWARPWFWVLPLHLGAFGLVSWACHSQLARSRP PAQQLTQFYLWLAVGGSLGGLFSALLAPQMFETLLEYPLLLGVSLAALAARGGRLGLSLGLGLLLPLLLLGFRPQALFRL GAAGGLALGMALLGSVGEGSRRRWVGTGMGLVLLLGQTWLPPGLQVVAEERSAFGLHRIVEYHAEDGSFRSLLHGTTLHG SQNLDPQKALEPLTYFSREGPVGQVFQRWRAQPPSSPAQVAVLGLGIGTLAAYAEPGDEWTFFELDPTVADWAGRYFPYL DWASRRAQVRVILGDARLRLQGIPDGSYDLMVIDAFSSDAVPVHLLTQEALTLYLRKLKPQGWLLFNITNRHLDLAPVLA ALARALRLPAWQQAHEELTAAQRRAGLAPSHWVLMAKSPGGRQDWDPWQPLLPQAGDPLWRDDFSNLLHVIRWPQLPLLG DIQIPAPKQNPAVIAARRFGNASALFSKTAKEIFTMQI
Sequences:
>Translated_758_residues MVLLVGLTLFGSAFCLFWGQLLVGKLLLPLWGGSPLVWNTCLVFFQLALLLGYLWADRLGRGLAPGWGVLLHGILLLAGL KFLPFQFGIPGQLEGVFPSLALLADLTARAGVPLLLLSGTTPLLQRALGEAKRDPYGLYVASNAGSLAGLLGYPLLLEPR LSLSGQTHLWTGSYALVAALVLLGGVGLMLNGREVTFPRGDPVEEIPPVSWRERWRWAGWAFLPAGLLVAATTLLTTDVA AVPLLWAVPLSLYLMTFILAFGGLYPNDLALGTTALLACGALGAQVLGWARPWFWVLPLHLGAFGLVSWACHSQLARSRP PAQQLTQFYLWLAVGGSLGGLFSALLAPQMFETLLEYPLLLGVSLAALAARGGRLGLSLGLGLLLPLLLLGFRPQALFRL GAAGGLALGMALLGSVGEGSRRRWVGTGMGLVLLLGQTWLPPGLQVVAEERSAFGLHRIVEYHAEDGSFRSLLHGTTLHG SQNLDPQKALEPLTYFSREGPVGQVFQRWRAQPPSSPAQVAVLGLGIGTLAAYAEPGDEWTFFELDPTVADWAGRYFPYL DWASRRAQVRVILGDARLRLQGIPDGSYDLMVIDAFSSDAVPVHLLTQEALTLYLRKLKPQGWLLFNITNRHLDLAPVLA ALARALRLPAWQQAHEELTAAQRRAGLAPSHWVLMAKSPGGRQDWDPWQPLLPQAGDPLWRDDFSNLLHVIRWPQLPLLG DIQIPAPKQNPAVIAARRFGNASALFSKTAKEIFTMQI >Mature_758_residues MVLLVGLTLFGSAFCLFWGQLLVGKLLLPLWGGSPLVWNTCLVFFQLALLLGYLWADRLGRGLAPGWGVLLHGILLLAGL KFLPFQFGIPGQLEGVFPSLALLADLTARAGVPLLLLSGTTPLLQRALGEAKRDPYGLYVASNAGSLAGLLGYPLLLEPR LSLSGQTHLWTGSYALVAALVLLGGVGLMLNGREVTFPRGDPVEEIPPVSWRERWRWAGWAFLPAGLLVAATTLLTTDVA AVPLLWAVPLSLYLMTFILAFGGLYPNDLALGTTALLACGALGAQVLGWARPWFWVLPLHLGAFGLVSWACHSQLARSRP PAQQLTQFYLWLAVGGSLGGLFSALLAPQMFETLLEYPLLLGVSLAALAARGGRLGLSLGLGLLLPLLLLGFRPQALFRL GAAGGLALGMALLGSVGEGSRRRWVGTGMGLVLLLGQTWLPPGLQVVAEERSAFGLHRIVEYHAEDGSFRSLLHGTTLHG SQNLDPQKALEPLTYFSREGPVGQVFQRWRAQPPSSPAQVAVLGLGIGTLAAYAEPGDEWTFFELDPTVADWAGRYFPYL DWASRRAQVRVILGDARLRLQGIPDGSYDLMVIDAFSSDAVPVHLLTQEALTLYLRKLKPQGWLLFNITNRHLDLAPVLA ALARALRLPAWQQAHEELTAAQRRAGLAPSHWVLMAKSPGGRQDWDPWQPLLPQAGDPLWRDDFSNLLHVIRWPQLPLLG DIQIPAPKQNPAVIAARRFGNASALFSKTAKEIFTMQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82131; Mature: 82131
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLVGLTLFGSAFCLFWGQLLVGKLLLPLWGGSPLVWNTCLVFFQLALLLGYLWADRLG CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RGLAPGWGVLLHGILLLAGLKFLPFQFGIPGQLEGVFPSLALLADLTARAGVPLLLLSGT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC TPLLQRALGEAKRDPYGLYVASNAGSLAGLLGYPLLLEPRLSLSGQTHLWTGSYALVAAL HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCEEECCCCCCCCCCEEEECCHHHHHHH VLLGGVGLMLNGREVTFPRGDPVEEIPPVSWRERWRWAGWAFLPAGLLVAATTLLTTDVA HHHCCCCEEECCCEEECCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AVPLLWAVPLSLYLMTFILAFGGLYPNDLALGTTALLACGALGAQVLGWARPWFWVLPLH HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGAFGLVSWACHSQLARSRPPAQQLTQFYLWLAVGGSLGGLFSALLAPQMFETLLEYPLL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LGVSLAALAARGGRLGLSLGLGLLLPLLLLGFRPQALFRLGAAGGLALGMALLGSVGEGS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCC RRRWVGTGMGLVLLLGQTWLPPGLQVVAEERSAFGLHRIVEYHAEDGSFRSLLHGTTLHG CCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEECC SQNLDPQKALEPLTYFSREGPVGQVFQRWRAQPPSSPAQVAVLGLGIGTLAAYAEPGDEW CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHCCCCCCE TFFELDPTVADWAGRYFPYLDWASRRAQVRVILGDARLRLQGIPDGSYDLMVIDAFSSDA EEEEECCCHHHHCCCCCCCHHHHCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCCCC VPVHLLTQEALTLYLRKLKPQGWLLFNITNRHLDLAPVLAALARALRLPAWQQAHEELTA CEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH AQRRAGLAPSHWVLMAKSPGGRQDWDPWQPLLPQAGDPLWRDDFSNLLHVIRWPQLPLLG HHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE DIQIPAPKQNPAVIAARRFGNASALFSKTAKEIFTMQI CEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVLLVGLTLFGSAFCLFWGQLLVGKLLLPLWGGSPLVWNTCLVFFQLALLLGYLWADRLG CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RGLAPGWGVLLHGILLLAGLKFLPFQFGIPGQLEGVFPSLALLADLTARAGVPLLLLSGT CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC TPLLQRALGEAKRDPYGLYVASNAGSLAGLLGYPLLLEPRLSLSGQTHLWTGSYALVAAL HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCEEECCCCCCCCCCEEEECCHHHHHHH VLLGGVGLMLNGREVTFPRGDPVEEIPPVSWRERWRWAGWAFLPAGLLVAATTLLTTDVA HHHCCCCEEECCCEEECCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AVPLLWAVPLSLYLMTFILAFGGLYPNDLALGTTALLACGALGAQVLGWARPWFWVLPLH HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGAFGLVSWACHSQLARSRPPAQQLTQFYLWLAVGGSLGGLFSALLAPQMFETLLEYPLL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LGVSLAALAARGGRLGLSLGLGLLLPLLLLGFRPQALFRLGAAGGLALGMALLGSVGEGS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCC RRRWVGTGMGLVLLLGQTWLPPGLQVVAEERSAFGLHRIVEYHAEDGSFRSLLHGTTLHG CCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEECC SQNLDPQKALEPLTYFSREGPVGQVFQRWRAQPPSSPAQVAVLGLGIGTLAAYAEPGDEW CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHCCCCCCE TFFELDPTVADWAGRYFPYLDWASRRAQVRVILGDARLRLQGIPDGSYDLMVIDAFSSDA EEEEECCCHHHHCCCCCCCHHHHCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCCCC VPVHLLTQEALTLYLRKLKPQGWLLFNITNRHLDLAPVLAALARALRLPAWQQAHEELTA CEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH AQRRAGLAPSHWVLMAKSPGGRQDWDPWQPLLPQAGDPLWRDDFSNLLHVIRWPQLPLLG HHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE DIQIPAPKQNPAVIAARRFGNASALFSKTAKEIFTMQI CEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA