| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yhdN [H]
Identifier: 86606144
GI number: 86606144
Start: 1485217
End: 1486212
Strand: Reverse
Name: yhdN [H]
Synonym: CYA_1477
Alternate gene names: 86606144
Gene position: 1486212-1485217 (Counterclockwise)
Preceding gene: 86606147
Following gene: 86606143
Centisome position: 50.68
GC content: 63.35
Gene sequence:
>996_bases ATGGAGTTTGTTACGCTTGCCGAGACGAGGCTAAAACTTAGCCGCGTGGGGCTGGGCACCTGGAGCATGACCGGGGATTG GTGGGGGCCAGCGGATCCCCAGGAAGCGTATGCCACCCTCCGCAAGGCTATTGACCTGGGCATTACGCTCTTTGACACGG CTCCGGCCTATGGCCGCGGCCTTTCGGAAGAGCTCTTGGGACGGGCCATCCGGGATGCCGGCTGTCGGGATCGCGTAGTC ATTGCCACCAAGGCCGGCCTGCAGTGGACTAACAGCAAGGTGGTGCGCAACTGCAGCCTAAGTTGGCTGGCTCAGGATCT GGAAAACTCCCTCCGCCGCCTGCAGACGGATGTGATCGACATCTACCAGGTGCATTGGCCGGATCCCTTGGAGCCCCTGG AGGAGACGGCTGCCTTTTTCGGCCGCTTGCTGCAGCAGGGCAAGATCCGCGCCATTGGGGTGAGCAACTTTTCTCCTCCG CAGATGGAGCGTTTCCGTCAGGTGGCTCCCCTGCATACCGTCCAGCCGCCCTATAACCTGTTTGAGCGCCAGATCGAAGC AGATGTCCTGCCCTACTGTCGTGCCAACGGTATTGCCACGCTGATCTACAGCCCCCTCTGTCGAGGGCTGTTGGGGGGAC GGCTGACGCCGCAAACCCAGTTTCCGCCTGGAGATCTGCGCGGCGGCATCGATCCCAAGTTTGCGGAGCCTCGCTACTCC CACTACTTGCAAGCAGCGGAAGAGCTGAGCCGGCTGGCGCGAGAGCGCTACGGCAAAACCCTGCCCCAGTTGGCGGTGCG CTGGCTCTTGGATCAGCCGGGAGTAAGTGCAATCCTGTGGGGAGCGCGCAAGCGCCAGCAGTTGGAGGACCTAGCCGGCG TGTGGGGCTGGTCGCTGGAGGCGGAGGCAATGCAGGCCATCGACGCGATCCTGCAAAGGCATGTCCCCGAACCCATCCCC CCCAGCTTCATGGCCCCCCCTGCCCGTGCTGCCTAG
Upstream 100 bases:
>100_bases CCACCAGCAGCTAGGCACGTGGGTTGTCTGCGCAACCGGCTTTGTCCTCCCCTGGCGCCTGTTAGCATCCTGAAACGGGA TCCTGTCTGCAGACGTTGCC
Downstream 100 bases:
>100_bases AGCAAGGAGTGGGGGGTAAGGCTGTCCAATGGCGCTGCAAGGGGTGATCCTAAGCTGGAGCGGTGTGGTGGCCGACGACG AGGGGCTGCACCTCCACGCC
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MEFVTLAETRLKLSRVGLGTWSMTGDWWGPADPQEAYATLRKAIDLGITLFDTAPAYGRGLSEELLGRAIRDAGCRDRVV IATKAGLQWTNSKVVRNCSLSWLAQDLENSLRRLQTDVIDIYQVHWPDPLEPLEETAAFFGRLLQQGKIRAIGVSNFSPP QMERFRQVAPLHTVQPPYNLFERQIEADVLPYCRANGIATLIYSPLCRGLLGGRLTPQTQFPPGDLRGGIDPKFAEPRYS HYLQAAEELSRLARERYGKTLPQLAVRWLLDQPGVSAILWGARKRQQLEDLAGVWGWSLEAEAMQAIDAILQRHVPEPIP PSFMAPPARAA
Sequences:
>Translated_331_residues MEFVTLAETRLKLSRVGLGTWSMTGDWWGPADPQEAYATLRKAIDLGITLFDTAPAYGRGLSEELLGRAIRDAGCRDRVV IATKAGLQWTNSKVVRNCSLSWLAQDLENSLRRLQTDVIDIYQVHWPDPLEPLEETAAFFGRLLQQGKIRAIGVSNFSPP QMERFRQVAPLHTVQPPYNLFERQIEADVLPYCRANGIATLIYSPLCRGLLGGRLTPQTQFPPGDLRGGIDPKFAEPRYS HYLQAAEELSRLARERYGKTLPQLAVRWLLDQPGVSAILWGARKRQQLEDLAGVWGWSLEAEAMQAIDAILQRHVPEPIP PSFMAPPARAA >Mature_331_residues MEFVTLAETRLKLSRVGLGTWSMTGDWWGPADPQEAYATLRKAIDLGITLFDTAPAYGRGLSEELLGRAIRDAGCRDRVV IATKAGLQWTNSKVVRNCSLSWLAQDLENSLRRLQTDVIDIYQVHWPDPLEPLEETAAFFGRLLQQGKIRAIGVSNFSPP QMERFRQVAPLHTVQPPYNLFERQIEADVLPYCRANGIATLIYSPLCRGLLGGRLTPQTQFPPGDLRGGIDPKFAEPRYS HYLQAAEELSRLARERYGKTLPQLAVRWLLDQPGVSAILWGARKRQQLEDLAGVWGWSLEAEAMQAIDAILQRHVPEPIP PSFMAPPARAA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=30.1538461538462, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI4504825, Length=323, Percent_Identity=30.030959752322, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI27436964, Length=326, Percent_Identity=29.4478527607362, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436962, Length=326, Percent_Identity=29.4478527607362, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI27436966, Length=322, Percent_Identity=29.5031055900621, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=26.1261261261261, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI223718702, Length=278, Percent_Identity=28.7769784172662, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI41152114, Length=298, Percent_Identity=29.1946308724832, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI41327764, Length=286, Percent_Identity=30.0699300699301, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI223468663, Length=289, Percent_Identity=26.2975778546713, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI223718708, Length=128, Percent_Identity=35.9375, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1788070, Length=334, Percent_Identity=33.8323353293413, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=30.1538461538462, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1789375, Length=306, Percent_Identity=32.3529411764706, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=28.9017341040462, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1788081, Length=315, Percent_Identity=31.1111111111111, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI48994888, Length=284, Percent_Identity=28.169014084507, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87082198, Length=320, Percent_Identity=26.875, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787674, Length=315, Percent_Identity=25.3968253968254, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786400, Length=203, Percent_Identity=30.0492610837438, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17564128, Length=335, Percent_Identity=24.7761194029851, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538386, Length=219, Percent_Identity=29.2237442922374, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17550248, Length=222, Percent_Identity=27.4774774774775, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323998, Length=327, Percent_Identity=25.3822629969419, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=296, Percent_Identity=23.9864864864865, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6325169, Length=302, Percent_Identity=24.8344370860927, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319951, Length=286, Percent_Identity=25.5244755244755, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=25.0996015936255, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24646155, Length=297, Percent_Identity=28.6195286195286, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24646159, Length=161, Percent_Identity=34.1614906832298, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24640980, Length=315, Percent_Identity=27.3015873015873, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI45549126, Length=315, Percent_Identity=27.3015873015873, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24644950, Length=335, Percent_Identity=25.9701492537313, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37063; Mature: 37063
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVTLAETRLKLSRVGLGTWSMTGDWWGPADPQEAYATLRKAIDLGITLFDTAPAYGRG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCHHCCC LSEELLGRAIRDAGCRDRVVIATKAGLQWTNSKVVRNCSLSWLAQDLENSLRRLQTDVID CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYQVHWPDPLEPLEETAAFFGRLLQQGKIRAIGVSNFSPPQMERFRQVAPLHTVQPPYNL HHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHH FERQIEADVLPYCRANGIATLIYSPLCRGLLGGRLTPQTQFPPGDLRGGIDPKFAEPRYS HHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH HYLQAAEELSRLARERYGKTLPQLAVRWLLDQPGVSAILWGARKRQQLEDLAGVWGWSLE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH AEAMQAIDAILQRHVPEPIPPSFMAPPARAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEFVTLAETRLKLSRVGLGTWSMTGDWWGPADPQEAYATLRKAIDLGITLFDTAPAYGRG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCHHCCC LSEELLGRAIRDAGCRDRVVIATKAGLQWTNSKVVRNCSLSWLAQDLENSLRRLQTDVID CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYQVHWPDPLEPLEETAAFFGRLLQQGKIRAIGVSNFSPPQMERFRQVAPLHTVQPPYNL HHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHH FERQIEADVLPYCRANGIATLIYSPLCRGLLGGRLTPQTQFPPGDLRGGIDPKFAEPRYS HHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH HYLQAAEELSRLARERYGKTLPQLAVRWLLDQPGVSAILWGARKRQQLEDLAGVWGWSLE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH AEAMQAIDAILQRHVPEPIPPSFMAPPARAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]