| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606111
Identifier: 86606111
GI number: 86606111
Start: 1449434
End: 1449745
Strand: Reverse
Name: 86606111
Synonym: CYA_1443
Alternate gene names: NA
Gene position: 1449745-1449434 (Counterclockwise)
Preceding gene: 86606112
Following gene: 86606110
Centisome position: 49.43
GC content: 57.69
Gene sequence:
>312_bases ATGGCCCCGCCTCGAAAACTCGCCCGCCAGATCCACCGCGCCCTGGCCCCCATCCTGGCTCTGCCCTTGGTGGTAACGGT GGTAACGGGATCCCTGTATCAAATTGCCCGCCTTAACCAAAACTTCGACTACTACTGGCTGATCCAAATCCACAAAGGGC AGTGGGGCCCCCTCGATCTGCAAGCGGTTTACCCGTTCTTAAACGGACTGGGGCTGCTGGTGATGGTGGCCACCGGTCTC AGTATGTGGTTACCCACAAAACTCCATCGCCGCCCCAAACATACGGAGTCCCAGAGGGTTTTGGATGGATAA
Upstream 100 bases:
>100_bases GGAAGCCCTCGGGATCCGTCCCTAGACCCAGGGGGGCTTGGCAGCTTGGGCTGCCCTGCTACCATGGCAAGGTGGTGGCC TTAGCCTTGGAGAAACCCTG
Downstream 100 bases:
>100_bases ACCTGTAGGGTAAACACCTAAGAAACATTCCAGAAAACCCTACATTTCCCGGAACGGATTTGAATACACTAGAAGCATAG AGGTTTTGCTTATACCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAPPRKLARQIHRALAPILALPLVVTVVTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDLQAVYPFLNGLGLLVMVATGL SMWLPTKLHRRPKHTESQRVLDG
Sequences:
>Translated_103_residues MAPPRKLARQIHRALAPILALPLVVTVVTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDLQAVYPFLNGLGLLVMVATGL SMWLPTKLHRRPKHTESQRVLDG >Mature_102_residues APPRKLARQIHRALAPILALPLVVTVVTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDLQAVYPFLNGLGLLVMVATGLS MWLPTKLHRRPKHTESQRVLDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11693; Mature: 11562
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPRKLARQIHRALAPILALPLVVTVVTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCCHH QAVYPFLNGLGLLVMVATGLSMWLPTKLHRRPKHTESQRVLDG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure APPRKLARQIHRALAPILALPLVVTVVTGSLYQIARLNQNFDYYWLIQIHKGQWGPLDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCCHH QAVYPFLNGLGLLVMVATGLSMWLPTKLHRRPKHTESQRVLDG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA