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The map label for this gene is ydcM [C]

Identifier: 86606106

GI number: 86606106

Start: 1445169

End: 1446401

Strand: Reverse

Name: ydcM [C]

Synonym: CYA_1438

Alternate gene names: 86606106

Gene position: 1446401-1445169 (Counterclockwise)

Preceding gene: 86606107

Following gene: 86606104

Centisome position: 49.32

GC content: 55.56

Gene sequence:

>1233_bases
ATGACGATCACCTCTCTCCCCAGCAGGAACTGGTTGAGGATATCCTCACCATCCTGCACTGCTTCAGCAGTCGGCTCTAC
GGACTCAGAAAATACCGGGCTGCAATCGAGAAAGATACGGATTTATCCGGAGCCAGCGCTGGCTAAAGTTTGGAAGCGGT
GGCAAGCGGCGTGCCGGTACTGCTACAACCAAGCGATTGCCTATCAGCGTCAGCATGGTGCCCCAAAAACGGCCAGAAAG
TTGCGGGACATCATCCTGCGCTCCGACCTACCCGAGTGGGTGAAGGACGTCCCTTGCCACATCAAGCAGAACGCGGTCGT
CGAGGCGTGGTTGGCGTTCCGCCGAAGCAAAGACGCGAGATTTCGCAGTGTGCGGGACAGGTCGCATACGCTGCAATTCA
ACGCCGGCAACTTTCGCAATGGGACGTGGTATCCGAAACTCACCCGAGGTTTGGCGTTCCGTGCATCCGAGGAGATGCCC
AGAGAATGGGCACGTGGAACTGAGCTAATGCGGGTGAAAGACAGATGGTATGCCATCTTTCCTGAGCCCGTGAACGAGCA
GTGTTCGTTAGCAAAGGGGGTGATCGCACTTGATCCTGGAGTAAGAAGCTTCCTTACAGGGTTTGATGGGGCGGGCTTTG
TAGATATCGCCAAGGGAGACTTTGGCAGGATCGTTCGGCTGTGCTACCACCTAGACGATCTGCAATCTAGGCTGAGTAAA
GCGCCGAGACTCAAGCGTAGGCGAATGCGGCAAGCGGCGTTTCGTCTGCGGGAGAGAATCAGGAACTTGGTGGACGAGTG
CCATCGCAAGGTAGCGGCGTTCCTAACGGATAACTACCGATTGATATTCCTCCCCACTTTCGAGTCAGCCAAGATGGTTG
CCAAGGCAGGGAGGAAGTTTGGTAGCAAGACAGCAAGGGCGATGCTCACCTGGGCGCACTATCGGTTCAAGCAGTTCCTG
AAGTTTCAAGCCAAGAAGAAAAACGTGGTCGTCGTGGAAGTATCGGAAGGGTACACCAGCAAAACCTGTACCAAGTGCGG
GCACATCCACACCAAGTTAGGTGGCGCGAAGGTGTTTGTCTGCCCAAGATGCGGACGCAAGCTACCACGGGACTGGCAAG
GCGCCCTGGGTGTCATGCTCAGGGCTTTGCGGGATACCGCCTTTCTGTTCAGTAATGGGCAGAATGCTATCGCTGCACCG
TTGAGCAGTAATGCTCAGCAGTGTTCAGCGTAA

Upstream 100 bases:

>100_bases
GGAACAATTGTGGTCGCTCACCGGGATCGACTCTGCCGGTTTGGATTTGAGTTCGTTGAGTGGTACTGCCGTCAATACGG
GTGCGAAATCTTGGTTCTCG

Downstream 100 bases:

>100_bases
ATGTATCAGCTTGCTACAAGGTGGGGGATACGCTGCCGGAAGAAGAGGGGGAAGAGAGCATGACTCTAGTCAATAATAAG
CTCAACTATACTGAAAATAA

Product: ISSoc2, transposase

Products: NA

Alternate protein names: ISSoc2 Transposase

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGAPKTARK
LRDIILRSDLPEWVKDVPCHIKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMP
REWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTARAMLTWAHYRFKQFL
KFQAKKKNVVVVEVSEGYTSKTCTKCGHIHTKLGGAKVFVCPRCGRKLPRDWQGALGVMLRALRDTAFLFSNGQNAIAAP
LSSNAQQCSA

Sequences:

>Translated_410_residues
MTITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGAPKTARK
LRDIILRSDLPEWVKDVPCHIKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMP
REWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTARAMLTWAHYRFKQFL
KFQAKKKNVVVVEVSEGYTSKTCTKCGHIHTKLGGAKVFVCPRCGRKLPRDWQGALGVMLRALRDTAFLFSNGQNAIAAP
LSSNAQQCSA
>Mature_409_residues
TITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGAPKTARKL
RDIILRSDLPEWVKDVPCHIKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMPR
EWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSKA
PRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTARAMLTWAHYRFKQFLK
FQAKKKNVVVVEVSEGYTSKTCTKCGHIHTKLGGAKVFVCPRCGRKLPRDWQGALGVMLRALRDTAFLFSNGQNAIAAPL
SSNAQQCSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46770; Mature: 46638

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRY
CCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
CYNQAIAYQRQHGAPKTARKLRDIILRSDLPEWVKDVPCHIKQNAVVEAWLAFRRSKDAR
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
FRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMPREWARGTELMRVKDRWYAIF
HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHEEEECCEEEEC
PEPVNEQCSLAKGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
CCCCCCHHHHHCCEEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEGYTSKTCTKCGHIHTKLGGAKVFV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHEECCCEEEEE
CPRCGRKLPRDWQGALGVMLRALRDTAFLFSNGQNAIAAPLSSNAQQCSA
CCHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCCHHHCCC
>Mature Secondary Structure 
TITSLPSRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRY
CCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
CYNQAIAYQRQHGAPKTARKLRDIILRSDLPEWVKDVPCHIKQNAVVEAWLAFRRSKDAR
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
FRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMPREWARGTELMRVKDRWYAIF
HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHEEEECCEEEEC
PEPVNEQCSLAKGVIALDPGVRSFLTGFDGAGFVDIAKGDFGRIVRLCYHLDDLQSRLSK
CCCCCCHHHHHCCEEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
GSKTARAMLTWAHYRFKQFLKFQAKKKNVVVVEVSEGYTSKTCTKCGHIHTKLGGAKVFV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHEECCCEEEEE
CPRCGRKLPRDWQGALGVMLRALRDTAFLFSNGQNAIAAPLSSNAQQCSA
CCHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA