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The map label for this gene is 86605892

Identifier: 86605892

GI number: 86605892

Start: 1217481

End: 1217972

Strand: Reverse

Name: 86605892

Synonym: CYA_1208

Alternate gene names: NA

Gene position: 1217972-1217481 (Counterclockwise)

Preceding gene: 86605894

Following gene: 86605890

Centisome position: 41.53

GC content: 64.23

Gene sequence:

>492_bases
ATGAACTTTCATCTCAAAGCTTCCGCCATTTTGGCCCTGCTGGCCACGACAGCCGTCGCTTCCAATGCCGCCGCCACAAC
CCCCAACGCCTGCTTCCTGCGCTACCTGCTGGCCTCCAGAACCTGTCCCAATTGCCGGCTGGGATCCCTTGAGCTGAGCA
ACCTGGATCTGGCAGAGGCTAACCTCCAGGGTGCCGACCTGATCGAGGCCAACCTGGAGCGCACCATCCTCACTGGCGCC
GATCTCAGCCAGTCCTACTTGGTGGGAGCCAATCTGCGGCGCGCCCAGTTGCGTGGCGCCGATCTCAGCGGTGCCTACCT
GGAGGGAGCGGACTTGCGGGGTGCTGATTTGCGGGGTGCCGATCTCTCTTCTGCCTCCCTGTACGGCGCCGACTTGCGGG
GGGCCGATCTGCGCGATGCCAATCTGACCGGGACTGACCTGAGCTTTGCCCGCACCTGGGGCACACGCCTTCAGGGCGCC
GTTCGGGAATAG

Upstream 100 bases:

>100_bases
CAGTGGCCGAAGCCGGCAGATGCCACTATCATGTGACCAACGCAAAACAACCCCGCTCTGCCGGATTGTCTCAGTCAACT
TTTTGTGAGGCTCGGTTACC

Downstream 100 bases:

>100_bases
TGCAATCGGCTGGTTGACCACTGCCCGCTTCCCCTCTCCTCCTTGGGAGAGGGGCTGGGGGTGAGGGCCCAGTGCGGATG
GCGAGACTCGAACTCGCATG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNFHLKASAILALLATTAVASNAAATTPNACFLRYLLASRTCPNCRLGSLELSNLDLAEANLQGADLIEANLERTILTGA
DLSQSYLVGANLRRAQLRGADLSGAYLEGADLRGADLRGADLSSASLYGADLRGADLRDANLTGTDLSFARTWGTRLQGA
VRE

Sequences:

>Translated_163_residues
MNFHLKASAILALLATTAVASNAAATTPNACFLRYLLASRTCPNCRLGSLELSNLDLAEANLQGADLIEANLERTILTGA
DLSQSYLVGANLRRAQLRGADLSGAYLEGADLRGADLRGADLSSASLYGADLRGADLRDANLTGTDLSFARTWGTRLQGA
VRE
>Mature_163_residues
MNFHLKASAILALLATTAVASNAAATTPNACFLRYLLASRTCPNCRLGSLELSNLDLAEANLQGADLIEANLERTILTGA
DLSQSYLVGANLRRAQLRGADLSGAYLEGADLRGADLRGADLSSASLYGADLRGADLRDANLTGTDLSFARTWGTRLQGA
VRE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=172, Percent_Identity=33.1395348837209, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 17127; Mature: 17127

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFHLKASAILALLATTAVASNAAATTPNACFLRYLLASRTCPNCRLGSLELSNLDLAEA
CCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEECCEECCCCCEECC
NLQGADLIEANLERTILTGADLSQSYLVGANLRRAQLRGADLSGAYLEGADLRGADLRGA
CCCCCHHHHHCCCEEEEECCCCCCCEEECCCCCCHHCCCCCCCCCEECCCCCCCCCCCCC
DLSSASLYGADLRGADLRDANLTGTDLSFARTWGTRLQGAVRE
CCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFHLKASAILALLATTAVASNAAATTPNACFLRYLLASRTCPNCRLGSLELSNLDLAEA
CCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEECCEECCCCCEECC
NLQGADLIEANLERTILTGADLSQSYLVGANLRRAQLRGADLSGAYLEGADLRGADLRGA
CCCCCHHHHHCCCEEEEECCCCCCCEEECCCCCCHHCCCCCCCCCEECCCCCCCCCCCCC
DLSSASLYGADLRGADLRDANLTGTDLSFARTWGTRLQGAVRE
CCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA