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The map label for this gene is rpmF

Identifier: 86605823

GI number: 86605823

Start: 1159539

End: 1159721

Strand: Reverse

Name: rpmF

Synonym: CYA_1135

Alternate gene names: 86605823

Gene position: 1159721-1159539 (Counterclockwise)

Preceding gene: 86605824

Following gene: 86605822

Centisome position: 39.54

GC content: 58.47

Gene sequence:

>183_bases
ATGCCTGTTCCTAAGAAGAAAACCTCCAAAGCCCGCAGTCGCAGGCGGTATGCGGTTTGGCTGGGCAAAGCCAAGCTTCA
GGCCCAGCGGGCGATGACCATTGGGCGCGCCATCCTCAGCGGTCGCAACACCGGCTTCTACTACCCCAAAGCCAAGTCGG
AAGAAGAGGAGGGAGAAGAATAG

Upstream 100 bases:

>100_bases
GCCGGAAAAAGCTTGACCCGCTTTATTGGGCCGGGTTTAGATTGGGATCGAGCGTGCAAACTCAGTGTTAGCCTAGTAAA
GCTGTGTTTTTGTACAAGCT

Downstream 100 bases:

>100_bases
GGATCCCCATAGCCGGAAGAGTGGTTTACATTGGGGTCAGGCTCTCTTGAGAGCTGTTCTGCTACCTCCCAGTCTTGGCT
GTTCAGCGACTTGCATGCGC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MPVPKKKTSKARSRRRYAVWLGKAKLQAQRAMTIGRAILSGRNTGFYYPKAKSEEEEGEE

Sequences:

>Translated_60_residues
MPVPKKKTSKARSRRRYAVWLGKAKLQAQRAMTIGRAILSGRNTGFYYPKAKSEEEEGEE
>Mature_59_residues
PVPKKKTSKARSRRRYAVWLGKAKLQAQRAMTIGRAILSGRNTGFYYPKAKSEEEEGEE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_SYNJA (Q2JVC0)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_474586.1
- ProteinModelPortal:   Q2JVC0
- SMR:   Q2JVC0
- STRING:   Q2JVC0
- GeneID:   3898824
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_1135
- TIGR:   CYA_1135
- HOGENOM:   HBG621788
- OMA:   TGRSTFV
- ProtClustDB:   PRK01110
- BioCyc:   SSP321327:CYA_1135-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6857; Mature: 6726

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPKKKTSKARSRRRYAVWLGKAKLQAQRAMTIGRAILSGRNTGFYYPKAKSEEEEGEE
CCCCCCCCHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
PVPKKKTSKARSRRRYAVWLGKAKLQAQRAMTIGRAILSGRNTGFYYPKAKSEEEEGEE
CCCCCCCHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA