| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605807
Identifier: 86605807
GI number: 86605807
Start: 1145282
End: 1145773
Strand: Reverse
Name: 86605807
Synonym: CYA_1118
Alternate gene names: NA
Gene position: 1145773-1145282 (Counterclockwise)
Preceding gene: 86605809
Following gene: 86605806
Centisome position: 39.07
GC content: 66.87
Gene sequence:
>492_bases GTGTCGGAAAGCCCCCAAAAAGTCGGCTGTGCCGCCCCTTTGGGCTGCTGTGGATGCGGCTGTCTGGGCCTGCTGGCGGT GCTGGGCTTGGGGCTGGCGGGGGCAGGGATCCTGGTCTGGAATGGGATCCGGGCTTCAGGCGCCTATCGCACCTACCAGT TGGCGGTGGAGCGGCTCGAACAGACTGCGGTGGTGGTGGAGCGGCTGGGGGATCCCCTGCGTCCGGGCTGGCCCTCGCGG CTGCGCTTTCAAGAGGATGAGCAAGCCGGCTGGGCCTGTCTGTCCTTTTTGATCACGGGATCCCGGCGCACCGGCGAGGT GGCTGTGGAGTCGGAGCGGGGGGTGGCCGGCTCAGCCTGGCAGTTGCGCCATCTGCAGGTGAAAGTGGATGGGGATCCAC AGGCCATACAGATCCTGAAAGGGGAGGGGGGATCCCGCTGTGAACAAGAGGAGCCGGCTGCAGGGGCAGTGCTGCCGACA GGCGAGATCTGA
Upstream 100 bases:
>100_bases ACTTTCTGCAATCCCTGCCAAGGGAGAGCTGGCTCCCCCCTCAGGGGGCAGCGCAGCCGTTCTGTGTTAGTTTGGGGGCG TCCTACTTCTGCGATTGGCT
Downstream 100 bases:
>100_bases GTAGTTGGACATGCTTAGCCGCGGGTAAAGTCAAAAGGACTCCGTCCCGCTGACGCGAACGGTTGTGGCCCTGGATCCCT ATGCGAACAGTTCCCTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSESPQKVGCAAPLGCCGCGCLGLLAVLGLGLAGAGILVWNGIRASGAYRTYQLAVERLEQTAVVVERLGDPLRPGWPSR LRFQEDEQAGWACLSFLITGSRRTGEVAVESERGVAGSAWQLRHLQVKVDGDPQAIQILKGEGGSRCEQEEPAAGAVLPT GEI
Sequences:
>Translated_163_residues MSESPQKVGCAAPLGCCGCGCLGLLAVLGLGLAGAGILVWNGIRASGAYRTYQLAVERLEQTAVVVERLGDPLRPGWPSR LRFQEDEQAGWACLSFLITGSRRTGEVAVESERGVAGSAWQLRHLQVKVDGDPQAIQILKGEGGSRCEQEEPAAGAVLPT GEI >Mature_162_residues SESPQKVGCAAPLGCCGCGCLGLLAVLGLGLAGAGILVWNGIRASGAYRTYQLAVERLEQTAVVVERLGDPLRPGWPSRL RFQEDEQAGWACLSFLITGSRRTGEVAVESERGVAGSAWQLRHLQVKVDGDPQAIQILKGEGGSRCEQEEPAAGAVLPTG EI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17129; Mature: 16998
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPQKVGCAAPLGCCGCGCLGLLAVLGLGLAGAGILVWNGIRASGAYRTYQLAVERLE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCCHHHHHHHHHHHH QTAVVVERLGDPLRPGWPSRLRFQEDEQAGWACLSFLITGSRRTGEVAVESERGVAGSAW HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCE QLRHLQVKVDGDPQAIQILKGEGGSRCEQEEPAAGAVLPTGEI EEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SESPQKVGCAAPLGCCGCGCLGLLAVLGLGLAGAGILVWNGIRASGAYRTYQLAVERLE CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCCHHHHHHHHHHHH QTAVVVERLGDPLRPGWPSRLRFQEDEQAGWACLSFLITGSRRTGEVAVESERGVAGSAW HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCE QLRHLQVKVDGDPQAIQILKGEGGSRCEQEEPAAGAVLPTGEI EEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA