| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86605792
Identifier: 86605792
GI number: 86605792
Start: 1128533
End: 1128991
Strand: Reverse
Name: 86605792
Synonym: CYA_1102
Alternate gene names: NA
Gene position: 1128991-1128533 (Counterclockwise)
Preceding gene: 86605793
Following gene: 86605788
Centisome position: 38.5
GC content: 65.36
Gene sequence:
>459_bases ATGGTGTTCAACCTCCCCCTGCAAGCCATTCCTCTGTTCTCCATCGCAGCGGCCATCCTGTTGGTGTACCTGCCTATGGG CGTGGTGGGCTATGCCCGCGCCCGCGTCGGCTACGATCCCCATGCGCCGCGGGCGATGTTCGACCGGCTGCCTCCCTACG GCCAGCGGGCTACCTGGGCCCACGCCAATGGCTTCGAGGCCCTGGGCACCTTTGCGCCCTCAGCTCTAGTAGCCTACGTC ACCGGCCCCCACCCGGATCCCTGGCTGTTTGGGCTCAGCGGCGACGAAGGGGTGGCCCTGCTCTGCGGCGTTTTCTTGCT GGCGCGGCTGCTCTACAACTTCTTCTACATTGGCGACATTCCTATCGGGCGCTCCCTCTCCTTCTTGGTCGGGTCGCTGG CCACGCTGGGCCTGCTGCTCATTGGCCTGTTGCCGTTTCTGGGCCAGAACCTGGCCTAG
Upstream 100 bases:
>100_bases GCCCGATGTTGCCAGAAACCTCCACCTAGCGCCTGGCAGAGCCGCTAGCCTGGAAAAGGTGCCAGTGCGGCTTTTCCCCC TCACCTTGCTGCTTTTGCCT
Downstream 100 bases:
>100_bases CCGGGCAGTTGCAGGGAAGACAGGGCCACCCCAGCCCGGTGGGCCACCACCACGCCAATGGCCTCTAGGTAGGAGCTAAC TGCCAAATGGGGGATCCCCA
Product: MAPEG family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MVFNLPLQAIPLFSIAAAILLVYLPMGVVGYARARVGYDPHAPRAMFDRLPPYGQRATWAHANGFEALGTFAPSALVAYV TGPHPDPWLFGLSGDEGVALLCGVFLLARLLYNFFYIGDIPIGRSLSFLVGSLATLGLLLIGLLPFLGQNLA
Sequences:
>Translated_152_residues MVFNLPLQAIPLFSIAAAILLVYLPMGVVGYARARVGYDPHAPRAMFDRLPPYGQRATWAHANGFEALGTFAPSALVAYV TGPHPDPWLFGLSGDEGVALLCGVFLLARLLYNFFYIGDIPIGRSLSFLVGSLATLGLLLIGLLPFLGQNLA >Mature_152_residues MVFNLPLQAIPLFSIAAAILLVYLPMGVVGYARARVGYDPHAPRAMFDRLPPYGQRATWAHANGFEALGTFAPSALVAYV TGPHPDPWLFGLSGDEGVALLCGVFLLARLLYNFFYIGDIPIGRSLSFLVGSLATLGLLLIGLLPFLGQNLA
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16289; Mature: 16289
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFNLPLQAIPLFSIAAAILLVYLPMGVVGYARARVGYDPHAPRAMFDRLPPYGQRATWA CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC HANGFEALGTFAPSALVAYVTGPHPDPWLFGLSGDEGVALLCGVFLLARLLYNFFYIGDI CCCCHHHHHHHCCHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC PIGRSLSFLVGSLATLGLLLIGLLPFLGQNLA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVFNLPLQAIPLFSIAAAILLVYLPMGVVGYARARVGYDPHAPRAMFDRLPPYGQRATWA CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC HANGFEALGTFAPSALVAYVTGPHPDPWLFGLSGDEGVALLCGVFLLARLLYNFFYIGDI CCCCHHHHHHHCCHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC PIGRSLSFLVGSLATLGLLLIGLLPFLGQNLA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA