| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yjeE [C]
Identifier: 86605780
GI number: 86605780
Start: 1111862
End: 1112482
Strand: Reverse
Name: yjeE [C]
Synonym: CYA_1090
Alternate gene names: 86605780
Gene position: 1112482-1111862 (Counterclockwise)
Preceding gene: 86605781
Following gene: 86605776
Centisome position: 37.93
GC content: 61.51
Gene sequence:
>621_bases ATGGCGAGCGCACGAGATGAAGAGCTTTGGCAACAAGCTTCCCCTCTGGTGTTGTCCTCTGCCGCTGCCACCCAATCGCT GGCGGCCCTGGTGGCTCAGGCCGCCGTTCGCCTCCTCAGAGGCCCGCAACACAGCCCCCAGCGCAGGAGCAAGACAGACT CCCCTCCCGGCCTGGTGATCCTTCTAGAGGGCAATCTGGGCAGCGGCAAAACCACCTTTGTGCAGGGGCTGGGGCAAGGG CTGGGGATCCCGGAGCCCATCGACAGCCCCACCTTCGTGCTGGTGCACGAATACCACACGGGACGGATCCCTCTTTTTCA TTGCGATCTCTACCGTCTAGAGTCCGCCTCTGGCGGAGCCGAGTCCTCAGCTCTGGACGATCTGGGGCTGGAAGAACTTT GGAGCCAAGCTGGGATCACCGCCATCGAGTGGCCTCAGTACCTGCCCTACTGGCCAGCAACCTACCTCTGGCTGTGCCTA GAAGCCCATCCCCAGGCAGAGGGATCCCGCCTGCTGTATGCCAAGGGCAAAGGATCCCAGCTCGCCCACCTTTGGCAACA AGTTCTCTCTCAATTCACCCAGCAAGACCCTCAAGAGAACGGGATTCTCTTCTCCTCCTGA
Upstream 100 bases:
>100_bases TCAAAGACGTGCTTCTGCTCACCTGAGCCCAGTGAGGCCCTCACCCGCTCTCTCGACAGGGATCCCTGCCCCTGAGCACC CCCCGAAGGAGCCGTAAGCC
Downstream 100 bases:
>100_bases AAGGGGATCCCGAATTCGTATGGACTTACCCTCAACCCAAGAGCCAAAACTCGCGCAACTGAAAAGACGGAGCTCACTTT CCTCGGCAATAGCCACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MASARDEELWQQASPLVLSSAAATQSLAALVAQAAVRLLRGPQHSPQRRSKTDSPPGLVILLEGNLGSGKTTFVQGLGQG LGIPEPIDSPTFVLVHEYHTGRIPLFHCDLYRLESASGGAESSALDDLGLEELWSQAGITAIEWPQYLPYWPATYLWLCL EAHPQAEGSRLLYAKGKGSQLAHLWQQVLSQFTQQDPQENGILFSS
Sequences:
>Translated_206_residues MASARDEELWQQASPLVLSSAAATQSLAALVAQAAVRLLRGPQHSPQRRSKTDSPPGLVILLEGNLGSGKTTFVQGLGQG LGIPEPIDSPTFVLVHEYHTGRIPLFHCDLYRLESASGGAESSALDDLGLEELWSQAGITAIEWPQYLPYWPATYLWLCL EAHPQAEGSRLLYAKGKGSQLAHLWQQVLSQFTQQDPQENGILFSS >Mature_205_residues ASARDEELWQQASPLVLSSAAATQSLAALVAQAAVRLLRGPQHSPQRRSKTDSPPGLVILLEGNLGSGKTTFVQGLGQGL GIPEPIDSPTFVLVHEYHTGRIPLFHCDLYRLESASGGAESSALDDLGLEELWSQAGITAIEWPQYLPYWPATYLWLCLE AHPQAEGSRLLYAKGKGSQLAHLWQQVLSQFTQQDPQENGILFSS
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=88, Percent_Identity=39.7727272727273, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 22415; Mature: 22284
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASARDEELWQQASPLVLSSAAATQSLAALVAQAAVRLLRGPQHSPQRRSKTDSPPGLVI CCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEE LLEGNLGSGKTTFVQGLGQGLGIPEPIDSPTFVLVHEYHTGRIPLFHCDLYRLESASGGA EEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEECHHEEECCCCCCC ESSALDDLGLEELWSQAGITAIEWPQYLPYWPATYLWLCLEAHPQAEGSRLLYAKGKGSQ CCHHHHHCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCH LAHLWQQVLSQFTQQDPQENGILFSS HHHHHHHHHHHHHHCCCCCCCCEECC >Mature Secondary Structure ASARDEELWQQASPLVLSSAAATQSLAALVAQAAVRLLRGPQHSPQRRSKTDSPPGLVI CCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEE LLEGNLGSGKTTFVQGLGQGLGIPEPIDSPTFVLVHEYHTGRIPLFHCDLYRLESASGGA EEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEECHHEEECCCCCCC ESSALDDLGLEELWSQAGITAIEWPQYLPYWPATYLWLCLEAHPQAEGSRLLYAKGKGSQ CCHHHHHCCHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCH LAHLWQQVLSQFTQQDPQENGILFSS HHHHHHHHHHHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9794762; 11759840 [H]