| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605714
Identifier: 86605714
GI number: 86605714
Start: 1035070
End: 1035588
Strand: Reverse
Name: 86605714
Synonym: CYA_1016
Alternate gene names: NA
Gene position: 1035588-1035070 (Counterclockwise)
Preceding gene: 86605722
Following gene: 86605713
Centisome position: 35.31
GC content: 60.89
Gene sequence:
>519_bases ATGCGGCTCGTCGACCAACAGGGGCGTCTCCTGGGCAAAGTCAGTCTCCTGGATCTGGGGGCGCTGGCAATTGTGGTGGC GGCGATTGTGGCTGTCCTGTTTTTGCCAGGGCGGCAGGCGGGCAGCGTCGTCCAGGTGGGGGGTGGCCCCACGCTGCCGG TGGAAGTGGATATGATTGTGCGGGGAGTCAGCAGCCGATCCCTGGAACCTTTTCAAGCAGGTCAGAAGGCCGACTTGATC ATCCGCAACCAACCCTACGGCCAGGTGGAGGTGGTGCGGGTGGAAAACGTCAGCCGCACTGTGCCGGTGGTTTTTCCCGA TGGACGGGTCGAAAACTTGCCTGACCCCGAGCCCTACCGCTTTGATCTGGTGTTTACCTTGCGGGGACGGGGCCAGCAGA CAGAAAATGGCATTGTCCTAGGCAACAACCGCGTCAAAGTCGGCGTTCCCCTGGAGCTCGAGACCTTTAGCTACAACTTG CGTGGAACCGTGATGGATGTGCGGCTGCTGCAATCGTAG
Upstream 100 bases:
>100_bases AGTCCCTCTAGAGGTGAGTTCCTCAAGCGGCTTTACGGGCGGGGAAGCTGCCATGGCTGTGCCCTACAATCAGGGACAGT GGGTTGGAGAAAAGAGGGCC
Downstream 100 bases:
>100_bases AGGATCTCGAGCCTGATGCAGCTACAGGAGATCGCCCAAAAATTGGGATGCCCCTACGAGGGAGATCCCACCCTAGAAAT TCACGGCGTGGCTAGCCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRLVDQQGRLLGKVSLLDLGALAIVVAAIVAVLFLPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSLEPFQAGQKADLI IRNQPYGQVEVVRVENVSRTVPVVFPDGRVENLPDPEPYRFDLVFTLRGRGQQTENGIVLGNNRVKVGVPLELETFSYNL RGTVMDVRLLQS
Sequences:
>Translated_172_residues MRLVDQQGRLLGKVSLLDLGALAIVVAAIVAVLFLPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSLEPFQAGQKADLI IRNQPYGQVEVVRVENVSRTVPVVFPDGRVENLPDPEPYRFDLVFTLRGRGQQTENGIVLGNNRVKVGVPLELETFSYNL RGTVMDVRLLQS >Mature_172_residues MRLVDQQGRLLGKVSLLDLGALAIVVAAIVAVLFLPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSLEPFQAGQKADLI IRNQPYGQVEVVRVENVSRTVPVVFPDGRVENLPDPEPYRFDLVFTLRGRGQQTENGIVLGNNRVKVGVPLELETFSYNL RGTVMDVRLLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18700; Mature: 18700
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVDQQGRLLGKVSLLDLGALAIVVAAIVAVLFLPGRQAGSVVQVGGGPTLPVEVDMIV CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHEE RGVSSRSLEPFQAGQKADLIIRNQPYGQVEVVRVENVSRTVPVVFPDGRVENLPDPEPYR ECCCCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEE FDLVFTLRGRGQQTENGIVLGNNRVKVGVPLELETFSYNLRGTVMDVRLLQS EEEEEEEECCCCCCCCCEEECCCEEEEECCEEEEEEEEECCEEEEEEEEECC >Mature Secondary Structure MRLVDQQGRLLGKVSLLDLGALAIVVAAIVAVLFLPGRQAGSVVQVGGGPTLPVEVDMIV CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHEE RGVSSRSLEPFQAGQKADLIIRNQPYGQVEVVRVENVSRTVPVVFPDGRVENLPDPEPYR ECCCCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEE FDLVFTLRGRGQQTENGIVLGNNRVKVGVPLELETFSYNLRGTVMDVRLLQS EEEEEEEECCCCCCCCCEEECCCEEEEECCEEEEEEEEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA