| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605703
Identifier: 86605703
GI number: 86605703
Start: 1018222
End: 1018578
Strand: Reverse
Name: 86605703
Synonym: CYA_1004
Alternate gene names: NA
Gene position: 1018578-1018222 (Counterclockwise)
Preceding gene: 86605706
Following gene: 86605702
Centisome position: 34.73
GC content: 50.7
Gene sequence:
>357_bases ATGTGGTTACTCAAACAGTTGGAAGTGAAGCTTTCAAAACCTTCTGTTGCTTCCTTGCTTTTGCTGGGCGTTTTGCCCCT CAGCAGCCCGATGCTAGGGGTAGGCGAAAGCACAGAGGCAGCTTTTGCTCAATCTCCTGCTCCAGCCGTCCGCATTGAAG AAGCGATTCAGATTGCTCGATCTGCTGTTCCCAATGCTGTGATCAAAGAAGTTGAGTTGGAGCGCGAAGATGGGCGCTTA GTTTGGGAAGTAAAATTCACCAACGATGTTGAAGTCCAGATCGACGCCACTAGCGGCGATGTTGTCGATATCGATGACTG CACGAACTGGGGTAAGCGTTGCCGGAAAAAGCGGTAG
Upstream 100 bases:
>100_bases ACGAACTACACCCTATGACGCAAGGAGCCCACTCCCCTTGCGAAGGCAACAATGCTCTTTTTGGCAAGGCTTCTTTCACC CCGAGGGTGGTAGGGTAAGA
Downstream 100 bases:
>100_bases TTGCCACTGCTTGATGAATGCTTGATGAAAAAGTAGCAATCTTGAGAACTGCAAAAGCTGGGGATCCCGTTCATTTGGGC AGGGGGAAGGTGTTCGCATA
Product: peptidase propeptide/YPEB domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MWLLKQLEVKLSKPSVASLLLLGVLPLSSPMLGVGESTEAAFAQSPAPAVRIEEAIQIARSAVPNAVIKEVELEREDGRL VWEVKFTNDVEVQIDATSGDVVDIDDCTNWGKRCRKKR
Sequences:
>Translated_118_residues MWLLKQLEVKLSKPSVASLLLLGVLPLSSPMLGVGESTEAAFAQSPAPAVRIEEAIQIARSAVPNAVIKEVELEREDGRL VWEVKFTNDVEVQIDATSGDVVDIDDCTNWGKRCRKKR >Mature_118_residues MWLLKQLEVKLSKPSVASLLLLGVLPLSSPMLGVGESTEAAFAQSPAPAVRIEEAIQIARSAVPNAVIKEVELEREDGRL VWEVKFTNDVEVQIDATSGDVVDIDDCTNWGKRCRKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12972; Mature: 12972
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLLKQLEVKLSKPSVASLLLLGVLPLSSPMLGVGESTEAAFAQSPAPAVRIEEAIQIAR CCCHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHH SAVPNAVIKEVELEREDGRLVWEVKFTNDVEVQIDATSGDVVDIDDCTNWGKRCRKKR HHCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEEECHHHHHHHHHHHCCC >Mature Secondary Structure MWLLKQLEVKLSKPSVASLLLLGVLPLSSPMLGVGESTEAAFAQSPAPAVRIEEAIQIAR CCCHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHH SAVPNAVIKEVELEREDGRLVWEVKFTNDVEVQIDATSGDVVDIDDCTNWGKRCRKKR HHCCHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA