| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605688
Identifier: 86605688
GI number: 86605688
Start: 1001774
End: 1002013
Strand: Reverse
Name: 86605688
Synonym: CYA_0988
Alternate gene names: NA
Gene position: 1002013-1001774 (Counterclockwise)
Preceding gene: 86605691
Following gene: 86605686
Centisome position: 34.17
GC content: 63.75
Gene sequence:
>240_bases ATGCCCACACCTCTTGGCCTGATAACCTGCGGCTCACCCTTCCCCCATGCTACCCAGGCAAGGCCGGTGCGGCAGGGGAT CCCGCGCAGTCCTCTTTTGGACTGGAGAGCAGCGGCTGATGCTTGGCCGCCCATCCGCCGGCAAGGGCGGGCCGCAAGCC CATTTTGGGGATCCCTGACTCGAGATGGCGGGGAAAACGAGGCTTTGATCCCCAGCGATCCCCAAGCTCTTGACCAATAG
Upstream 100 bases:
>100_bases GGTTTGCGCTTCAACAGCTTCCCCCGGCCAGACCAGGATCCCCAGCGCTGCCCAGATCGCTCGCATCCCTGCACCGTGAG TCCTATCTTTCCACCACCTC
Downstream 100 bases:
>100_bases GCAAAAATACGTGAACATAAGTTCATCATTCCTTTGATCCCCGTTGATCCCGACCTATGGTCATCAGCGGTTGGAAAACG CCAAGCAGGCTGTTACCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPTPLGLITCGSPFPHATQARPVRQGIPRSPLLDWRAAADAWPPIRRQGRAASPFWGSLTRDGGENEALIPSDPQALDQ
Sequences:
>Translated_79_residues MPTPLGLITCGSPFPHATQARPVRQGIPRSPLLDWRAAADAWPPIRRQGRAASPFWGSLTRDGGENEALIPSDPQALDQ >Mature_78_residues PTPLGLITCGSPFPHATQARPVRQGIPRSPLLDWRAAADAWPPIRRQGRAASPFWGSLTRDGGENEALIPSDPQALDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8540; Mature: 8409
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLGLITCGSPFPHATQARPVRQGIPRSPLLDWRAAADAWPPIRRQGRAASPFWGSLT CCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RDGGENEALIPSDPQALDQ CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTPLGLITCGSPFPHATQARPVRQGIPRSPLLDWRAAADAWPPIRRQGRAASPFWGSLT CCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RDGGENEALIPSDPQALDQ CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA