Click here to switch to the map view.

The map label for this gene is gvpC

Identifier: 86605531

GI number: 86605531

Start: 839461

End: 840459

Strand: Reverse

Name: gvpC

Synonym: CYA_0827

Alternate gene names: NA

Gene position: 840459-839461 (Counterclockwise)

Preceding gene: 86605532

Following gene: 86605530

Centisome position: 28.66

GC content: 62.76

Gene sequence:

>999_bases
ATGGCCCACAACCAACGGGTGGCCCAGAATCAAAGTTTGTTCAGTCAATCCCGGCAGCAGCGTCTGGAGCAGCACCGAGC
TCTGATAGCCGAGCTGGAGCAACGCCGCCGGGAACGACAAGAGGCAATCCGGCAACAGAGGGAGCAAACCCGTAGGCAAC
TGAAGAGCTTCAACCAGAGCCGGGCGGCGCAGCGGGCCTTGGACGAGCATTCTCGCATGGAGGCTGTGGCCCAGCGGGTC
AAAGCGGTGGCGGAGCTTCTCTCCCGCATGGCTCAAGAGCGAGCCGCCCAATCGCAGGCCCAGCAGCAGGAGCTGCAGAC
TTTTCAAGCCAACTTGACAGCGACGGTGGGGAGATTGCTGAGCACCTGTGCACAGGCCCGGCAGACCATGGCCGGCCAAA
CTCGACAAGCTCGCCAGTCTTTTTATGCTGAGTTGCGGCAGCGGGTACAGGCTTTGCAGCAGCTCGCGCGGCAGGAGCTG
GCTCAGGTCGCTCAGGATCAGCGGGCAGAGGCCCAGGCTCTGCGGCAAGCTTTGGCGGCTTTCCGCAGGGCGTTGCACGA
GCAGGTCTGGGGGAATGGGATCCCAGAGGCCCAACCCATCATCCCTTCTGAGGGCTTGGAAGGTGAAAAGTCTGAGAGCT
CGGCCAATGCCTCGAAAACGGTTTCGGCTGAGGTTTCCCTGCCAAAGCCTGTGGTTGCGGTCTCAGAAGAGGCGGCTCCT
CCTCCCCCTCAGCCTGTGGTGACTCCGCCACCACCTGAACCTGCTCCAGTTCGGCCCGCGCCCCCGCAGGAGGCAAGTTC
GGATCGCATCATGGCCTACGTCAACAACTATGTAACCAACCTGCAAGCGCAGGCTCCCGATCTAACTTTGCTGCAGGTGA
TCGGGGATCGGGAGCGGGTGCGGGATCTGCTGGCCCGCGGTGCGGTGGATCTGGGGGTGGATCCCTCCGAGATCCTGGCC
ACCTTGCGGCGTATGGTGTCAGCGACGGTTGCCATCTGA

Upstream 100 bases:

>100_bases
GTGGACTGCGTAAGAATCCCCCGCCTTTAGGCGGTGGGAGTGTCAAAGTAAAAACCAACAGGAGAGAGGGAGCGCCATGA
GTTTGCGGGAACAGTGGGCC

Downstream 100 bases:

>100_bases
TCCCGGCCTAACACCTGTGAGCGCAAGAAGACCGTTGCCGCTATAGTCGAGGCAAGAGCGTCAAGGCAATTGAGAGTTGG
GTATTGCTATGGCCACGGTT

Product: gas vesicle structural protein GvpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MAHNQRVAQNQSLFSQSRQQRLEQHRALIAELEQRRRERQEAIRQQREQTRRQLKSFNQSRAAQRALDEHSRMEAVAQRV
KAVAELLSRMAQERAAQSQAQQQELQTFQANLTATVGRLLSTCAQARQTMAGQTRQARQSFYAELRQRVQALQQLARQEL
AQVAQDQRAEAQALRQALAAFRRALHEQVWGNGIPEAQPIIPSEGLEGEKSESSANASKTVSAEVSLPKPVVAVSEEAAP
PPPQPVVTPPPPEPAPVRPAPPQEASSDRIMAYVNNYVTNLQAQAPDLTLLQVIGDRERVRDLLARGAVDLGVDPSEILA
TLRRMVSATVAI

Sequences:

>Translated_332_residues
MAHNQRVAQNQSLFSQSRQQRLEQHRALIAELEQRRRERQEAIRQQREQTRRQLKSFNQSRAAQRALDEHSRMEAVAQRV
KAVAELLSRMAQERAAQSQAQQQELQTFQANLTATVGRLLSTCAQARQTMAGQTRQARQSFYAELRQRVQALQQLARQEL
AQVAQDQRAEAQALRQALAAFRRALHEQVWGNGIPEAQPIIPSEGLEGEKSESSANASKTVSAEVSLPKPVVAVSEEAAP
PPPQPVVTPPPPEPAPVRPAPPQEASSDRIMAYVNNYVTNLQAQAPDLTLLQVIGDRERVRDLLARGAVDLGVDPSEILA
TLRRMVSATVAI
>Mature_331_residues
AHNQRVAQNQSLFSQSRQQRLEQHRALIAELEQRRRERQEAIRQQREQTRRQLKSFNQSRAAQRALDEHSRMEAVAQRVK
AVAELLSRMAQERAAQSQAQQQELQTFQANLTATVGRLLSTCAQARQTMAGQTRQARQSFYAELRQRVQALQQLARQELA
QVAQDQRAEAQALRQALAAFRRALHEQVWGNGIPEAQPIIPSEGLEGEKSESSANASKTVSAEVSLPKPVVAVSEEAAPP
PPQPVVTPPPPEPAPVRPAPPQEASSDRIMAYVNNYVTNLQAQAPDLTLLQVIGDRERVRDLLARGAVDLGVDPSEILAT
LRRMVSATVAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36888; Mature: 36757

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHNQRVAQNQSLFSQSRQQRLEQHRALIAELEQRRRERQEAIRQQREQTRRQLKSFNQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAQRALDEHSRMEAVAQRVKAVAELLSRMAQERAAQSQAQQQELQTFQANLTATVGRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STCAQARQTMAGQTRQARQSFYAELRQRVQALQQLARQELAQVAQDQRAEAQALRQALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRALHEQVWGNGIPEAQPIIPSEGLEGEKSESSANASKTVSAEVSLPKPVVAVSEEAAP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCC
PPPQPVVTPPPPEPAPVRPAPPQEASSDRIMAYVNNYVTNLQAQAPDLTLLQVIGDRERV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHH
RDLLARGAVDLGVDPSEILATLRRMVSATVAI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHNQRVAQNQSLFSQSRQQRLEQHRALIAELEQRRRERQEAIRQQREQTRRQLKSFNQS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA