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The map label for this gene is gvpJ

Identifier: 86605529

GI number: 86605529

Start: 838116

End: 838448

Strand: Reverse

Name: gvpJ

Synonym: CYA_0825

Alternate gene names: 86605529

Gene position: 838448-838116 (Counterclockwise)

Preceding gene: 86605530

Following gene: 86605528

Centisome position: 28.59

GC content: 58.26

Gene sequence:

>333_bases
GTGCCTATTACCTCTCAACCCCTGGCCACGGCAACGCATGGCTCCTCTCTGGCCGATGTCTTGGAGCGGGTTTTGGACAA
GGGGATTGTCATCGCCGGGGATATCACCGTTTCGGTGGGCAATGTGGAGCTGCTCAATGTGCGCATTCGGCTGCTGATCG
CTTCGGTGGACAAGGCCAAGGAGATTGGGATCAACTGGTGGGAATCGGATCCCTATCTCAGCAGCCAAGCCCGCGAGCTG
CTGGAAACCAACCGCCAGTTACTGCAGCGGGTCAGCGAGCTGGAAAAGCAACTGGCCCAAGGCCTGCCCAAGGGAGGAAA
TGGTAAGGACTAA

Upstream 100 bases:

>100_bases
CAAGCGCTACGAGGAAGGAGCCCAGGTGCTCAACTATTTGCTGGATCAACTGCCCGGCTGATATTTGTATGCTTTCGCAC
ACTTTGGAGGGAAATTCTCT

Downstream 100 bases:

>100_bases
CGCGCTGCCCCGCCAGCGGGGCCAGGGATCCCGGGCTAGACTGGCAGGTGGGGTGGTTTGATTGGGGTGATGCGCATGGC
GGTCGGGATCGACCTTGAGC

Product: gas vesicle protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPITSQPLATATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLIASVDKAKEIGINWWESDPYLSSQAREL
LETNRQLLQRVSELEKQLAQGLPKGGNGKD

Sequences:

>Translated_110_residues
MPITSQPLATATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLIASVDKAKEIGINWWESDPYLSSQAREL
LETNRQLLQRVSELEKQLAQGLPKGGNGKD
>Mature_109_residues
PITSQPLATATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLIASVDKAKEIGINWWESDPYLSSQARELL
ETNRQLLQRVSELEKQLAQGLPKGGNGKD

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 11959; Mature: 11828

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00234 GAS_VESICLE_A_1 ; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITSQPLATATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLIASVDKAK
CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCEEEEECCEEEHHHHHHHHHHHHHHHH
EIGINWWESDPYLSSQARELLETNRQLLQRVSELEKQLAQGLPKGGNGKD
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PITSQPLATATHGSSLADVLERVLDKGIVIAGDITVSVGNVELLNVRIRLLIASVDKAK
CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCEEEEECCEEEHHHHHHHHHHHHHHHH
EIGINWWESDPYLSSQARELLETNRQLLQRVSELEKQLAQGLPKGGNGKD
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA