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The map label for this gene is cse1

Identifier: 86605446

GI number: 86605446

Start: 738036

End: 739610

Strand: Reverse

Name: cse1

Synonym: CYA_0734

Alternate gene names: NA

Gene position: 739610-738036 (Counterclockwise)

Preceding gene: 86605447

Following gene: 86605445

Centisome position: 25.22

GC content: 47.43

Gene sequence:

>1575_bases
ATGGAAACTCAGTCCTTTAATCTCACCAAAGAAAAGTGGATCCCTGTACTCGATCCCGATTTTCGAATCCAAGAGTTGTC
TTTAGTTGAGTTATTTAGAGAGTGGGAAAGCCTGAAAGAGATGCGAGGAGATAATCCGCCTACTACTTTAGCTCTCTACC
GTTTTCTACTGGCAATAATGCACCGAGCCTATCTTGGACCAAAAGATACGGATCACTGGAAGGAAATCTTTCAAGACAAT
GGAAAGCGAGTTATTAAGTACTTGCAGGATAGGCAAGATTGTTTTGACCTATTCCATCCCACTCACCCCTTCATGCAGGA
TCCAGCTCTACCTATAGAAAAAGCTGTGCCTGTCCACTCCATCCATACCATGAGCACCTCTGAAGTATTCTTTCATGAAC
ACGAATGGAGCGGCTACAGCATCTCCTTACCGGAAGCTGCTCGACTATTGGTGCGTCTACAGGGAGTTGACATCACTAGC
CTAAGGGCATTTTATGTTGGGCAAGACAGCGGCAATCACTCTGCTGTAAACACTCCGACTATGAATGTTGCCAATGTCCT
TTTGAAAGGGAGAACCTTAAAAGAGACGCTGATGCTGAACTTGATGCGGTATAGCCCAGAGGATGAGATGCCCAGTGTAG
TAGCTGGAGAAGATGTACCCACCTGGGAAACCAAAGTTGGCTACACTGGCCAACCGAAAAAAGAGATCCCTGCGGGATAC
ATCCACTATTTAACCTTTCCCTGGCGGCGGCTGCGGCTGTTTTCAGAAGCTGGGCGAGTGCAGCAATTGGCTATTACTAT
GGGCAACTCCCTACCCAACGGTGTAGAGGCCCGGCAGTGGGAATGTAGCGTTGCCTATAAAGAAGATAAACCAGTGCGTC
TATCTTTACACAGACAGTTGTGGCGGGATGCGGACAGCTTTCTCCTGACGGCTAGCAAGCAAACCCGTCCTCGGATTGTG
GACTGGCTAGCTGAGCTCAAGTCAGAAGAATTGGTCAATAATTTGGTTGTGTTTGAAGTGTTGGGTATGAGCGCCGACCA
GGCTAAACCTTTAGGATGGAGCTCGGCTCGATTTTCAGTTCCAATGCAGTTTGTTACAGATTCGGAGTTGGCGCAGAGTT
TAAAAAGCGCTATTGGAATTGCCGAGAACCATCAACAAATCTTTCGATCTTCTAAAGGTAGCCCCTACTTTTCTCTAGCA
GAGGTTCTTAAAAACGGAGAGACTGAGAAGCTATCCAAAGCTTTAGACGGAGAGTCTCGCTACTGGGCAATTCTAGACCA
CGCTTTCTCAATGCTACTTCATGATTTACCCCAAGATAACCAACCTGGAGCTGATGGAATTATCTACTATGGACTTACCA
CTCTACCTGCCTGGACTAAGACTGTGCAAGATGCCGCTCGGCGAGCCTTCACCGAGTCCATTGAGTCTATTCGCAACTAT
CAGGCCAGAGCGGCTGCCTTGCGCACGCTGGAGAGAAAACTAGCAGAGCTTCGTGCGGATCCAAGGGAAAAGAAAGCTCA
AAAACAAAAAGCAGCTAAGAAAAAGCAGAAGAAGGAGCAAGCTGTTGTCCAATAG

Upstream 100 bases:

>100_bases
GCCGAAGGCTGGGCTCAAGTTGGCAAATGGCGACTGCGGTTGGATCCTAACCTAGGGATCACCATCGAGAAGATGAACAG
CTAACGTTAGGGAGGAGCTC

Downstream 100 bases:

>100_bases
GAGGCCAAGTTATGTCTACAACTCAAATCTCTTCCCATAATCGACTGGAACGGGCAAAAAAGTTCTTACAAGAAATCAAG
GATCGCCTCAAAAACGACAC

Product: CRISPR-associated Cse1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; Cse1 Family CRISPR-Associated Protein; CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
METQSFNLTKEKWIPVLDPDFRIQELSLVELFREWESLKEMRGDNPPTTLALYRFLLAIMHRAYLGPKDTDHWKEIFQDN
GKRVIKYLQDRQDCFDLFHPTHPFMQDPALPIEKAVPVHSIHTMSTSEVFFHEHEWSGYSISLPEAARLLVRLQGVDITS
LRAFYVGQDSGNHSAVNTPTMNVANVLLKGRTLKETLMLNLMRYSPEDEMPSVVAGEDVPTWETKVGYTGQPKKEIPAGY
IHYLTFPWRRLRLFSEAGRVQQLAITMGNSLPNGVEARQWECSVAYKEDKPVRLSLHRQLWRDADSFLLTASKQTRPRIV
DWLAELKSEELVNNLVVFEVLGMSADQAKPLGWSSARFSVPMQFVTDSELAQSLKSAIGIAENHQQIFRSSKGSPYFSLA
EVLKNGETEKLSKALDGESRYWAILDHAFSMLLHDLPQDNQPGADGIIYYGLTTLPAWTKTVQDAARRAFTESIESIRNY
QARAAALRTLERKLAELRADPREKKAQKQKAAKKKQKKEQAVVQ

Sequences:

>Translated_524_residues
METQSFNLTKEKWIPVLDPDFRIQELSLVELFREWESLKEMRGDNPPTTLALYRFLLAIMHRAYLGPKDTDHWKEIFQDN
GKRVIKYLQDRQDCFDLFHPTHPFMQDPALPIEKAVPVHSIHTMSTSEVFFHEHEWSGYSISLPEAARLLVRLQGVDITS
LRAFYVGQDSGNHSAVNTPTMNVANVLLKGRTLKETLMLNLMRYSPEDEMPSVVAGEDVPTWETKVGYTGQPKKEIPAGY
IHYLTFPWRRLRLFSEAGRVQQLAITMGNSLPNGVEARQWECSVAYKEDKPVRLSLHRQLWRDADSFLLTASKQTRPRIV
DWLAELKSEELVNNLVVFEVLGMSADQAKPLGWSSARFSVPMQFVTDSELAQSLKSAIGIAENHQQIFRSSKGSPYFSLA
EVLKNGETEKLSKALDGESRYWAILDHAFSMLLHDLPQDNQPGADGIIYYGLTTLPAWTKTVQDAARRAFTESIESIRNY
QARAAALRTLERKLAELRADPREKKAQKQKAAKKKQKKEQAVVQ
>Mature_524_residues
METQSFNLTKEKWIPVLDPDFRIQELSLVELFREWESLKEMRGDNPPTTLALYRFLLAIMHRAYLGPKDTDHWKEIFQDN
GKRVIKYLQDRQDCFDLFHPTHPFMQDPALPIEKAVPVHSIHTMSTSEVFFHEHEWSGYSISLPEAARLLVRLQGVDITS
LRAFYVGQDSGNHSAVNTPTMNVANVLLKGRTLKETLMLNLMRYSPEDEMPSVVAGEDVPTWETKVGYTGQPKKEIPAGY
IHYLTFPWRRLRLFSEAGRVQQLAITMGNSLPNGVEARQWECSVAYKEDKPVRLSLHRQLWRDADSFLLTASKQTRPRIV
DWLAELKSEELVNNLVVFEVLGMSADQAKPLGWSSARFSVPMQFVTDSELAQSLKSAIGIAENHQQIFRSSKGSPYFSLA
EVLKNGETEKLSKALDGESRYWAILDHAFSMLLHDLPQDNQPGADGIIYYGLTTLPAWTKTVQDAARRAFTESIESIRNY
QARAAALRTLERKLAELRADPREKKAQKQKAAKKKQKKEQAVVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59860; Mature: 59860

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQSFNLTKEKWIPVLDPDFRIQELSLVELFREWESLKEMRGDNPPTTLALYRFLLAIM
CCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
HRAYLGPKDTDHWKEIFQDNGKRVIKYLQDRQDCFDLFHPTHPFMQDPALPIEKAVPVHS
HHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHH
IHTMSTSEVFFHEHEWSGYSISLPEAARLLVRLQGVDITSLRAFYVGQDSGNHSAVNTPT
EECCCCCHHEEEECCCCCCEEECHHHHHHHHHHCCCCEEHEEEEEEECCCCCCCCCCCCC
MNVANVLLKGRTLKETLMLNLMRYSPEDEMPSVVAGEDVPTWETKVGYTGQPKKEIPAGY
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCE
IHYLTFPWRRLRLFSEAGRVQQLAITMGNSLPNGVEARQWECSVAYKEDKPVRLSLHRQL
EHHHHCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
WRDADSFLLTASKQTRPRIVDWLAELKSEELVNNLVVFEVLGMSADQAKPLGWSSARFSV
HHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PMQFVTDSELAQSLKSAIGIAENHQQIFRSSKGSPYFSLAEVLKNGETEKLSKALDGESR
CHHHHCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCH
YWAILDHAFSMLLHDLPQDNQPGADGIIYYGLTTLPAWTKTVQDAARRAFTESIESIRNY
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QARAAALRTLERKLAELRADPREKKAQKQKAAKKKQKKEQAVVQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METQSFNLTKEKWIPVLDPDFRIQELSLVELFREWESLKEMRGDNPPTTLALYRFLLAIM
CCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
HRAYLGPKDTDHWKEIFQDNGKRVIKYLQDRQDCFDLFHPTHPFMQDPALPIEKAVPVHS
HHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHH
IHTMSTSEVFFHEHEWSGYSISLPEAARLLVRLQGVDITSLRAFYVGQDSGNHSAVNTPT
EECCCCCHHEEEECCCCCCEEECHHHHHHHHHHCCCCEEHEEEEEEECCCCCCCCCCCCC
MNVANVLLKGRTLKETLMLNLMRYSPEDEMPSVVAGEDVPTWETKVGYTGQPKKEIPAGY
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCE
IHYLTFPWRRLRLFSEAGRVQQLAITMGNSLPNGVEARQWECSVAYKEDKPVRLSLHRQL
EHHHHCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH
WRDADSFLLTASKQTRPRIVDWLAELKSEELVNNLVVFEVLGMSADQAKPLGWSSARFSV
HHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PMQFVTDSELAQSLKSAIGIAENHQQIFRSSKGSPYFSLAEVLKNGETEKLSKALDGESR
CHHHHCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCH
YWAILDHAFSMLLHDLPQDNQPGADGIIYYGLTTLPAWTKTVQDAARRAFTESIESIRNY
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QARAAALRTLERKLAELRADPREKKAQKQKAAKKKQKKEQAVVQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA