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The map label for this gene is cse4

Identifier: 86605444

GI number: 86605444

Start: 736216

End: 737358

Strand: Reverse

Name: cse4

Synonym: CYA_0732

Alternate gene names: 86605444

Gene position: 737358-736216 (Counterclockwise)

Preceding gene: 86605445

Following gene: 86605443

Centisome position: 25.14

GC content: 48.73

Gene sequence:

>1143_bases
ATGCGACTGGAAATTCATTTGATTCAAAGTTTCCCTCCTGCCAACCTAAACCGCGATGAAAATGGCATGCCTAAATCTAC
GATATTCGGCGGTCGTCCACGAGCGCGAATCTCTAGCCAGTGCCAGAAGCGGGCAGTGCGAAAATACTATCACCAATATG
CTGAGCTAGACCCGGCTCACTTTGCCGCTCGCTCTCGCAACTGGCTCCCTGAGTTGAAATCTAAGCTTGTGAAGGCAGGG
ATCCCTGATGAGCAAGCTGGAATGGCCGCTCGGCTTGCCTTAGAGCAAGGGCTTAAGCTCAAGTTTAATGATAAAAATGA
AGCCACCACCATTGTATTTTTGGGGAAGACGGAACTTGATGCAATTGCCGAAATCTTAATCAAAAACTGGTCTGCCATTG
AATCCGGATTGCGAGAGGAAAAGCCCAAACTTCCCCAAAAAATAGCCAAGGCGATCGAAAAAGCTTTGGTTGATACAGGA
AAACCCGGTGATGTAGCTTTGTTTGGTCGGATGATGGCCTCGCTACCCACAGTCAATGTCGATGCTGCTGTTCAGGTAGC
CCATGCAATTAGTATCAATGCCCTACAACAAGAGTTCGACTTCTTTACAGCCGTAGACGACCTGGGCAGTAGTGAGGACA
CCGGAGCCGATCACATGGGCGAGACGGGGTACAACAGCTCTACATACTACCGCTTTGCTGTTCTCGACAAGAAACAGTTG
GTTGAAAACCTAGGCGGAACTGAACATCTAGGATCCATCATCAAGGCTTTTGCTACGGCTTTCATTCATGCTGTGCCCAG
TGGACATCAAAACGGATTTGCCGCTCACACTCGGCCAGCATTGGTGATGGCAGTAGTTCGGGAAGGGCAGCCTATTTCCT
TAGTGGATGCCTTTGAAAATCCGGTTGCTCCCAGTGGAGGATTTAGCCTACTGGAAAATGCCGTTAAAGCTTTAGATGAG
TATTGGGGATCACTGGTCAAGATGTATGGAGAAGCTGACGTGCAGTATAAAGGCGTTGTTGTCCTTGATAGGCTGGCTGC
GAGACTCAATGTACTCAAGTCTAGCAAGAAAGATTCTGTAGAAGAGCTCTTAAAAAGTGCTCTCAAAGCCTTTGGCGTGG
CCAGCAACGGCCAAGGAGCTTAG

Upstream 100 bases:

>100_bases
GGTTTCCGATGATCTCAGAGAGGATGTAGGCTGAGAGCACTTACCCCTGTTTGAGCTAACAAACTTGTTCCGACACTATA
CCCTTAGAGGAGAAACAGCC

Downstream 100 bases:

>100_bases
ATCATGACTACGCTTCTCATGCGATTGCGGGCTCCGATGATGAGCTGGGGCGACCACAGCCAGTTTGATTATCGCGATAG
CCGTCGTGAGCCTACAAAGT

Product: CRISPR-associated Cse4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRLEIHLIQSFPPANLNRDENGMPKSTIFGGRPRARISSQCQKRAVRKYYHQYAELDPAHFAARSRNWLPELKSKLVKAG
IPDEQAGMAARLALEQGLKLKFNDKNEATTIVFLGKTELDAIAEILIKNWSAIESGLREEKPKLPQKIAKAIEKALVDTG
KPGDVALFGRMMASLPTVNVDAAVQVAHAISINALQQEFDFFTAVDDLGSSEDTGADHMGETGYNSSTYYRFAVLDKKQL
VENLGGTEHLGSIIKAFATAFIHAVPSGHQNGFAAHTRPALVMAVVREGQPISLVDAFENPVAPSGGFSLLENAVKALDE
YWGSLVKMYGEADVQYKGVVVLDRLAARLNVLKSSKKDSVEELLKSALKAFGVASNGQGA

Sequences:

>Translated_380_residues
MRLEIHLIQSFPPANLNRDENGMPKSTIFGGRPRARISSQCQKRAVRKYYHQYAELDPAHFAARSRNWLPELKSKLVKAG
IPDEQAGMAARLALEQGLKLKFNDKNEATTIVFLGKTELDAIAEILIKNWSAIESGLREEKPKLPQKIAKAIEKALVDTG
KPGDVALFGRMMASLPTVNVDAAVQVAHAISINALQQEFDFFTAVDDLGSSEDTGADHMGETGYNSSTYYRFAVLDKKQL
VENLGGTEHLGSIIKAFATAFIHAVPSGHQNGFAAHTRPALVMAVVREGQPISLVDAFENPVAPSGGFSLLENAVKALDE
YWGSLVKMYGEADVQYKGVVVLDRLAARLNVLKSSKKDSVEELLKSALKAFGVASNGQGA
>Mature_380_residues
MRLEIHLIQSFPPANLNRDENGMPKSTIFGGRPRARISSQCQKRAVRKYYHQYAELDPAHFAARSRNWLPELKSKLVKAG
IPDEQAGMAARLALEQGLKLKFNDKNEATTIVFLGKTELDAIAEILIKNWSAIESGLREEKPKLPQKIAKAIEKALVDTG
KPGDVALFGRMMASLPTVNVDAAVQVAHAISINALQQEFDFFTAVDDLGSSEDTGADHMGETGYNSSTYYRFAVLDKKQL
VENLGGTEHLGSIIKAFATAFIHAVPSGHQNGFAAHTRPALVMAVVREGQPISLVDAFENPVAPSGGFSLLENAVKALDE
YWGSLVKMYGEADVQYKGVVVLDRLAARLNVLKSSKKDSVEELLKSALKAFGVASNGQGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=340, Percent_Identity=32.9411764705882, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 41319; Mature: 41319

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEIHLIQSFPPANLNRDENGMPKSTIFGGRPRARISSQCQKRAVRKYYHQYAELDPAH
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
FAARSRNWLPELKSKLVKAGIPDEQAGMAARLALEQGLKLKFNDKNEATTIVFLGKTELD
HHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCHH
AIAEILIKNWSAIESGLREEKPKLPQKIAKAIEKALVDTGKPGDVALFGRMMASLPTVNV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCH
DAAVQVAHAISINALQQEFDFFTAVDDLGSSEDTGADHMGETGYNSSTYYRFAVLDKKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH
VENLGGTEHLGSIIKAFATAFIHAVPSGHQNGFAAHTRPALVMAVVREGQPISLVDAFEN
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHCC
PVAPSGGFSLLENAVKALDEYWGSLVKMYGEADVQYKGVVVLDRLAARLNVLKSSKKDSV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
EELLKSALKAFGVASNGQGA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLEIHLIQSFPPANLNRDENGMPKSTIFGGRPRARISSQCQKRAVRKYYHQYAELDPAH
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
FAARSRNWLPELKSKLVKAGIPDEQAGMAARLALEQGLKLKFNDKNEATTIVFLGKTELD
HHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCHH
AIAEILIKNWSAIESGLREEKPKLPQKIAKAIEKALVDTGKPGDVALFGRMMASLPTVNV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCH
DAAVQVAHAISINALQQEFDFFTAVDDLGSSEDTGADHMGETGYNSSTYYRFAVLDKKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH
VENLGGTEHLGSIIKAFATAFIHAVPSGHQNGFAAHTRPALVMAVVREGQPISLVDAFEN
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHCC
PVAPSGGFSLLENAVKALDEYWGSLVKMYGEADVQYKGVVVLDRLAARLNVLKSSKKDSV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
EELLKSALKAFGVASNGQGA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]