| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is tal
Identifier: 86605437
GI number: 86605437
Start: 730086
End: 731264
Strand: Reverse
Name: tal
Synonym: CYA_0725
Alternate gene names: 86605437
Gene position: 731264-730086 (Counterclockwise)
Preceding gene: 86605438
Following gene: 86605436
Centisome position: 24.93
GC content: 58.86
Gene sequence:
>1179_bases ATGAGCAGGAGCTTGCTGGAGCAGTTGCGAGAGATGACGGTGGTGGTGGCCGACACGGGGGATATCAACGCCATCGAGAC CTTTAAGCCGCAGGATGCCACCACCAATCCCTCTTTGATTACAGCAGCCGCCCAAATGCCCCAGTACCAGGGCATTGTCG ATGAGACCTTGCTCAAGGCCCGCCAAGACCTGGGATCCAAAGCCGACACCAAAGCCGTGGTGGCCCACGCCATCGACCAA CTGGCGGTGGCCTTTGGCGTGCGCATTTTGTCCATCATCCCCGGTCGGGTTTCGACGGAGGTGGACGCCCGGCTCTCCTA CGACACAGCAGCCACCGTGGCCAAGGCCCGCCATCTCATCGAGCTCTACAAGGCGGCAGGGGCGGATCCCAAGCGGGTGC TCATTAAGATTGCGGCTACTTGGGAAGGGATCCGCGCCGCCGAGATCCTGGAAAAAGAAGGGATCCACTGCAACCTGACT TTGATGTTTGGCCTGCACCAGGCCATTGCCTGCGCCGAAGCGGGGGTAACCCTCATCTCGCCCTTTGTGGGCCGCATCCT GGATTGGTACAAAAAACACACAGGCCGGGAGAGCTACCCGCCCGCCGAAGATCCAGGCGTGCAGTCGGTAACCCAGATCT ACAACTATCTGCGCAAATACGATTACCCAACGGAAGTGATGGGGGCCAGCTTTCGCAACATTGGCGAGATCATCGAGCTG GCCGGCTGCGATCTCCTAACCATCTCGCCGGCTTTGTTGGCGGAGCTGCAAAACACCGAGGGCCACCTGGAGCGCAAGCT GGATCCGGAAAAAGCTAAGAAAATGGATATTCCCCGCCTGGTGATGGATCGGGCCACCTTCGACCAGATGCACCGGGAAA ACCGCATGGCCTCGGAAAAACTAGAAGAAGGGATCCAGGGCTTCTCCAAGGCGCTGGAGGTGCTGGAAAAACTGCTCACC GAGCGGCTGCAGAAGCTGGAGGGCGCCAAGGAAACGATTACCCACGCCGCCCAGGATGTCTTCCGCATCTACGACCTGGA TGGGGATGGCTTCATCACCCGCGAGGAGTGGATGGGAGCAGATCGCGTCTTCGATGCCCTCGACACTAACCAAGATGGCA AAATTACTCCCGAAGAAATGCTGGTCGGACTGGGGGCAGCCGTTTATCTGAGAAATTAG
Upstream 100 bases:
>100_bases GGCTAGACAATTAAGACAATCTCACATCTACCGGGATCCCTTGCCTAGGTGGGCGACACTGGGGCTAGGTCGCAGAAGCG CGATATCTAAGGAGGGGAGT
Downstream 100 bases:
>100_bases CCAGGCAAGCAAGCCCTATGGGCGAGAGCTTTCGCCGCTTTGGAGACGCAGTAGCCGCCCTGGAGGCCCAGGCCCGCCGC TGGATTGCCCAGTATCTGCA
Product: transaldolase/EF-hand domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSRSLLEQLREMTVVVADTGDINAIETFKPQDATTNPSLITAAAQMPQYQGIVDETLLKARQDLGSKADTKAVVAHAIDQ LAVAFGVRILSIIPGRVSTEVDARLSYDTAATVAKARHLIELYKAAGADPKRVLIKIAATWEGIRAAEILEKEGIHCNLT LMFGLHQAIACAEAGVTLISPFVGRILDWYKKHTGRESYPPAEDPGVQSVTQIYNYLRKYDYPTEVMGASFRNIGEIIEL AGCDLLTISPALLAELQNTEGHLERKLDPEKAKKMDIPRLVMDRATFDQMHRENRMASEKLEEGIQGFSKALEVLEKLLT ERLQKLEGAKETITHAAQDVFRIYDLDGDGFITREEWMGADRVFDALDTNQDGKITPEEMLVGLGAAVYLRN
Sequences:
>Translated_392_residues MSRSLLEQLREMTVVVADTGDINAIETFKPQDATTNPSLITAAAQMPQYQGIVDETLLKARQDLGSKADTKAVVAHAIDQ LAVAFGVRILSIIPGRVSTEVDARLSYDTAATVAKARHLIELYKAAGADPKRVLIKIAATWEGIRAAEILEKEGIHCNLT LMFGLHQAIACAEAGVTLISPFVGRILDWYKKHTGRESYPPAEDPGVQSVTQIYNYLRKYDYPTEVMGASFRNIGEIIEL AGCDLLTISPALLAELQNTEGHLERKLDPEKAKKMDIPRLVMDRATFDQMHRENRMASEKLEEGIQGFSKALEVLEKLLT ERLQKLEGAKETITHAAQDVFRIYDLDGDGFITREEWMGADRVFDALDTNQDGKITPEEMLVGLGAAVYLRN >Mature_391_residues SRSLLEQLREMTVVVADTGDINAIETFKPQDATTNPSLITAAAQMPQYQGIVDETLLKARQDLGSKADTKAVVAHAIDQL AVAFGVRILSIIPGRVSTEVDARLSYDTAATVAKARHLIELYKAAGADPKRVLIKIAATWEGIRAAEILEKEGIHCNLTL MFGLHQAIACAEAGVTLISPFVGRILDWYKKHTGRESYPPAEDPGVQSVTQIYNYLRKYDYPTEVMGASFRNIGEIIELA GCDLLTISPALLAELQNTEGHLERKLDPEKAKKMDIPRLVMDRATFDQMHRENRMASEKLEEGIQGFSKALEVLEKLLTE RLQKLEGAKETITHAAQDVFRIYDLDGDGFITREEWMGADRVFDALDTNQDGKITPEEMLVGLGAAVYLRN
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 EF-hand domains [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=328, Percent_Identity=57.0121951219512, Blast_Score=372, Evalue=1e-103, Organism=Escherichia coli, GI1786189, Length=318, Percent_Identity=56.6037735849057, Blast_Score=355, Evalue=2e-99, Organism=Escherichia coli, GI1788807, Length=319, Percent_Identity=52.0376175548589, Blast_Score=315, Evalue=5e-87, Organism=Caenorhabditis elegans, GI25153750, Length=321, Percent_Identity=53.5825545171339, Blast_Score=344, Evalue=5e-95, Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=52.1212121212121, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=44.3298969072165, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321480, Length=327, Percent_Identity=49.8470948012232, Blast_Score=308, Evalue=1e-84, Organism=Saccharomyces cerevisiae, GI6323386, Length=329, Percent_Identity=54.7112462006079, Blast_Score=306, Evalue=5e-84, Organism=Drosophila melanogaster, GI45549185, Length=322, Percent_Identity=54.6583850931677, Blast_Score=353, Evalue=1e-97,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011992 - InterPro: IPR018247 - InterPro: IPR018249 - InterPro: IPR002048 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 43413; Mature: 43282
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 ; PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSLLEQLREMTVVVADTGDINAIETFKPQDATTNPSLITAAAQMPQYQGIVDETLLKA CCHHHHHHHHHCEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCHHCCHHHHHHHHH RQDLGSKADTKAVVAHAIDQLAVAFGVRILSIIPGRVSTEVDARLSYDTAATVAKARHLI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHH ELYKAAGADPKRVLIKIAATWEGIRAAEILEKEGIHCNLTLMFGLHQAIACAEAGVTLIS HHHHHCCCCHHHHHEEHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHHHH PFVGRILDWYKKHTGRESYPPAEDPGVQSVTQIYNYLRKYDYPTEVMGASFRNIGEIIEL HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AGCDLLTISPALLAELQNTEGHLERKLDPEKAKKMDIPRLVMDRATFDQMHRENRMASEK HCCCCEEECHHHHHHHHCCHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LEEGIQGFSKALEVLEKLLTERLQKLEGAKETITHAAQDVFRIYDLDGDGFITREEWMGA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCEEHHHHCCH DRVFDALDTNQDGKITPEEMLVGLGAAVYLRN HHHHHHHCCCCCCCCCHHHHHHHCCCEEEECC >Mature Secondary Structure SRSLLEQLREMTVVVADTGDINAIETFKPQDATTNPSLITAAAQMPQYQGIVDETLLKA CHHHHHHHHHCEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCHHCCHHHHHHHHH RQDLGSKADTKAVVAHAIDQLAVAFGVRILSIIPGRVSTEVDARLSYDTAATVAKARHLI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHH ELYKAAGADPKRVLIKIAATWEGIRAAEILEKEGIHCNLTLMFGLHQAIACAEAGVTLIS HHHHHCCCCHHHHHEEHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHHHH PFVGRILDWYKKHTGRESYPPAEDPGVQSVTQIYNYLRKYDYPTEVMGASFRNIGEIIEL HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AGCDLLTISPALLAELQNTEGHLERKLDPEKAKKMDIPRLVMDRATFDQMHRENRMASEK HCCCCEEECHHHHHHHHCCHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LEEGIQGFSKALEVLEKLLTERLQKLEGAKETITHAAQDVFRIYDLDGDGFITREEWMGA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCEEHHHHCCH DRVFDALDTNQDGKITPEEMLVGLGAAVYLRN HHHHHHHCCCCCCCCCHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]