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The map label for this gene is frr

Identifier: 86605415

GI number: 86605415

Start: 711147

End: 711695

Strand: Reverse

Name: frr

Synonym: CYA_0703

Alternate gene names: 86605415

Gene position: 711695-711147 (Counterclockwise)

Preceding gene: 86605417

Following gene: 86605414

Centisome position: 24.27

GC content: 57.92

Gene sequence:

>549_bases
GTGGAGCTAGCTGAGATTGAGGAGTTGATGAACAAAGCTGTGCAAGCCACACAGCGCTCCTTTAATACGGTGCGCACCGG
GCGGGCCAATTCCAGCCTGCTGGATCGCATTCAGGTGGAGTACTACGGCGTGCCCACTCCCCTCAAGGCCCTGGCCAGCC
TCACCACGCCAGACTCCAGCACTCTCTTGATCCAGCCTTTTGATCCCTCGACCCTGGCGGCCATTGAGCGGGCCATTGTC
GCCTCTGACCTAGGTCTAACCCCCAGCAACGACGGCAAGGTGGTGCGGCTCACCATTCCCCCCCTGACAGAAGAGCGGCG
CAAAGAGCTGAGCAAACAGGTGGCCAAGCTGGCCGAAGAGGGGCGAGTCTCGATCCGCAACATCCGGCGGGATGGCATTG
ACTCGGTGCGCAAGCGAGAGAAAAATGGCGAGCTGTCTGAAGATGAGTCCAAAAGCTTGCAGGATGCCATCCAGAAACTA
ACTGACCGCTACATTAAGAAGATCGATGAGCTGCTGGCAGAAAAAGAAAAGGAGCTGACGACCCTGTGA

Upstream 100 bases:

>100_bases
GACAAGGCGGTAGAATTGAGGTCAGGCTCACCGTAGAGGGGCCAGGTTGGCTGCCCAAGCCTGACTGTCTGGAAACTGTT
TTGAAAGCGAGGAAAACCCC

Downstream 100 bases:

>100_bases
AGGCTCCTTGCTGGCATCCTCCCCACTCTACTGGATTGCTTCTGCGCAGCGGTAGGACGGGGTTATGACCCAATTTTTTG
ATAAAAACCCGGACACCCGT

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLIQPFDPSTLAAIERAIV
ASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKL
TDRYIKKIDELLAEKEKELTTL

Sequences:

>Translated_182_residues
MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLIQPFDPSTLAAIERAIV
ASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKL
TDRYIKKIDELLAEKEKELTTL
>Mature_182_residues
MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLIQPFDPSTLAAIERAIV
ASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKL
TDRYIKKIDELLAEKEKELTTL

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Homo sapiens, GI20270317, Length=181, Percent_Identity=27.0718232044199, Blast_Score=64, Evalue=6e-11,
Organism=Escherichia coli, GI1786368, Length=173, Percent_Identity=53.757225433526, Blast_Score=178, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24661488, Length=171, Percent_Identity=30.4093567251462, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 20347; Mature: 20347

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEE
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKLTDRYIKKIDELLAEKEKELT
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TL
CC
>Mature Secondary Structure
MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEE
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
GRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKLTDRYIKKIDELLAEKEKELT
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA