Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605406

Identifier: 86605406

GI number: 86605406

Start: 702091

End: 702585

Strand: Reverse

Name: 86605406

Synonym: CYA_0694

Alternate gene names: NA

Gene position: 702585-702091 (Counterclockwise)

Preceding gene: 86605407

Following gene: 86605405

Centisome position: 23.96

GC content: 56.97

Gene sequence:

>495_bases
ATGAGCATTCAACTTCCTCGCTGGCTAGAACTGGCCTTGCCTTTCTTTCATCCTGTGCTGATGATTTTGGCGTTTGCGCT
GGCCCTGTATGCCCTTTACCTGGGTCTGCAAGCGCGACGGGTGCGCACTGCCTCGGCAGAAGAACGCAAGGAGCTGATCA
AAGGGAAGTTTGGTCAGCGGCATTTCCTCGCCGGATCCCTGTTCTTGGTGTTGATGGTGTTCGGAGCCCTGGGCGGCATG
GGGGTTACCTACCTGAACAACGGCAAGCTGTTTGTTGGGCCTCACCTGCTGGCTGGGTTGGGCATTGTGGCCTTGGTGGC
CAGCTCTGCGGCTCTAGCACCGCTGATGAAAGACGGGCAAAAGGTCTGGGCGCGTAATGTGCATGTCCTATTAAACGTGG
TGATCCTGGCGATCTTGGGTTGGCAGGCGGTGACCGGCTTTCAGATTGTGCAGCGCATCGTCAACCAAATGCTGACCACA
CCCCAGGTGGCTTAA

Upstream 100 bases:

>100_bases
CATAGGGTGCCAGTCCGCTGCGCTGAGACTGGAGACTGCCGCGCATCAGGTTAACTCATGTTAATTTGGGGGCGTCTTCC
TCTTCCATCCTGCGATCTCT

Downstream 100 bases:

>100_bases
TCTCCCCGAAAGACCCATGCAACCCTGAACAGGGCTGAGCTTTGGGAGGACTTTGTCCCGCTGGTGCGAGCCGAGAAGTC
CGTCGACCCAAAGACTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSIQLPRWLELALPFFHPVLMILAFALALYALYLGLQARRVRTASAEERKELIKGKFGQRHFLAGSLFLVLMVFGALGGM
GVTYLNNGKLFVGPHLLAGLGIVALVASSAALAPLMKDGQKVWARNVHVLLNVVILAILGWQAVTGFQIVQRIVNQMLTT
PQVA

Sequences:

>Translated_164_residues
MSIQLPRWLELALPFFHPVLMILAFALALYALYLGLQARRVRTASAEERKELIKGKFGQRHFLAGSLFLVLMVFGALGGM
GVTYLNNGKLFVGPHLLAGLGIVALVASSAALAPLMKDGQKVWARNVHVLLNVVILAILGWQAVTGFQIVQRIVNQMLTT
PQVA
>Mature_163_residues
SIQLPRWLELALPFFHPVLMILAFALALYALYLGLQARRVRTASAEERKELIKGKFGQRHFLAGSLFLVLMVFGALGGMG
VTYLNNGKLFVGPHLLAGLGIVALVASSAALAPLMKDGQKVWARNVHVLLNVVILAILGWQAVTGFQIVQRIVNQMLTTP
QVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17887; Mature: 17756

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQLPRWLELALPFFHPVLMILAFALALYALYLGLQARRVRTASAEERKELIKGKFGQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCH
HFLAGSLFLVLMVFGALGGMGVTYLNNGKLFVGPHLLAGLGIVALVASSAALAPLMKDGQ
HHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVWARNVHVLLNVVILAILGWQAVTGFQIVQRIVNQMLTTPQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIQLPRWLELALPFFHPVLMILAFALALYALYLGLQARRVRTASAEERKELIKGKFGQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCH
HFLAGSLFLVLMVFGALGGMGVTYLNNGKLFVGPHLLAGLGIVALVASSAALAPLMKDGQ
HHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVWARNVHVLLNVVILAILGWQAVTGFQIVQRIVNQMLTTPQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA