| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605395
Identifier: 86605395
GI number: 86605395
Start: 688930
End: 689640
Strand: Reverse
Name: 86605395
Synonym: CYA_0683
Alternate gene names: NA
Gene position: 689640-688930 (Counterclockwise)
Preceding gene: 86605396
Following gene: 86605394
Centisome position: 23.52
GC content: 55.56
Gene sequence:
>711_bases ATGGAGTTACCACAAACTGGGGAACGCTGGGATCCCTACCTTGCTGCCGTAGCTGCTCGCTTCAATCGGGAGCTGGAAAT TCAACTGGGTCGGCCAGGTTGGCAACTTCCCCCAGACCTGGAGCAACTGCCTTTTTGGCAAGCCCAGCAGCGGGATCACC TGCAAGAGCGCCTCGGGATCCCCTTTTGGCAACTGCGTGCCCCCAAAAAACGGGAAGCCTGTTTGGATTTGGGCTGTGGG GTAAGCTTCCTGACCTATCCCTGGAACGATTGGCAAGCCTACTTTTACGGCCATGAGCTGAGCGGTGAGATTGTGCGCTT TATTCGCTCGCGGGCACCCCAGCTTAACTCCAAGCTGTTCAAGTCAATGCAACAGGGATCCGCCCACCATTTGGAAAACT ACGAGTCGGAGCAATTTGATCTGGCCATTGCCACCGGATTTTTGTACTACTACCCGATTGAGTACTTCGACGCGGTTTGG GCAGAGTTGATGCGAGTGTTGCGACCGGCTGCACCTGTGATTATTGAAGTGGTCAATCCCGACTCGGTGTGGGCGGAACA ATGGGGCCTCATCGAGCTATTCAAAGGCACCGAACCGATTTTCACCCCCCTAACGGAGTGGGAGCGGCGCATCGCAGCCT TGGGGGGCAAAATTCAGAAACAGGCCAGTGGCGAACTGTTCACCACCTATTGGATTCAGCGCAGACCGTGA
Upstream 100 bases:
>100_bases AATGGATCCCTGCAGCCGGGAGCCTACGGGCCGAGAGTCCTGGTAGTGTAGGTTAAGTGCAAGTTAAGTCCACAACCATC CACGACAAAGCCATCAACAG
Downstream 100 bases:
>100_bases TCTGCTCACAACCGGGAAAGTATCGGAGCATTCGGAGTAGTGGGGTAACCTTTAAGGCTGGGTACTAAGATTAAAAATAA GATAAAGATTAAGATTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MELPQTGERWDPYLAAVAARFNRELEIQLGRPGWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLDLGCG VSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVW AELMRVLRPAAPVIIEVVNPDSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP
Sequences:
>Translated_236_residues MELPQTGERWDPYLAAVAARFNRELEIQLGRPGWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLDLGCG VSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVW AELMRVLRPAAPVIIEVVNPDSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP >Mature_236_residues MELPQTGERWDPYLAAVAARFNRELEIQLGRPGWQLPPDLEQLPFWQAQQRDHLQERLGIPFWQLRAPKKREACLDLGCG VSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLFKSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVW AELMRVLRPAAPVIIEVVNPDSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27648; Mature: 27648
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPQTGERWDPYLAAVAARFNRELEIQLGRPGWQLPPDLEQLPFWQAQQRDHLQERLGI CCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHCC PFWQLRAPKKREACLDLGCGVSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLF CCEECCCCCHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHH KSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIEVVNP HHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC DSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP CHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEEEEECC >Mature Secondary Structure MELPQTGERWDPYLAAVAARFNRELEIQLGRPGWQLPPDLEQLPFWQAQQRDHLQERLGI CCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHCC PFWQLRAPKKREACLDLGCGVSFLTYPWNDWQAYFYGHELSGEIVRFIRSRAPQLNSKLF CCEECCCCCHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHH KSMQQGSAHHLENYESEQFDLAIATGFLYYYPIEYFDAVWAELMRVLRPAAPVIIEVVNP HHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC DSVWAEQWGLIELFKGTEPIFTPLTEWERRIAALGGKIQKQASGELFTTYWIQRRP CHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA