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The map label for this gene is 86605390

Identifier: 86605390

GI number: 86605390

Start: 686139

End: 686762

Strand: Reverse

Name: 86605390

Synonym: CYA_0678

Alternate gene names: NA

Gene position: 686762-686139 (Counterclockwise)

Preceding gene: 86605394

Following gene: 86605385

Centisome position: 23.42

GC content: 59.46

Gene sequence:

>624_bases
ATGTGGGCTGGTTTTGCGTCAAGTTTGCTGTTGGTTACGGTAGCTGAGTTTGGGGATAAGACCTTTTTTACCCCCCTGAT
TCTGGCTATGCGGCACCCACGCCGCTGGGTCTTCTTGGGAACGTGGCTGGCTTTGGCCGCGATGACCTTGCTGGCTGTGG
TGGCCGGGAAAGTGCTTTTTGAGCTGCTGCCACCCCTGGGCGTGCGAGTGCTATCGGCTGGAGTTTTCGCGGCTTTTGGG
CTAAGAATGCTCTGGCAAGCTTACCAAATGACTCCCCAGCAGGAGAAGGAAGAAGAGGAAGAAGCCCTCAGGCTGGTGGA
GCAAGCCGAAGCAAAAGGCGCTGGCCGCGGCGGGGCTTGGGCTGTTGTGTGGGAGGCCTTTAGCCTGACCGCCTTGGCCG
AGTTCGGGGACAAAACCCAGATTGCCACCGTTTCCTTGGCAGCCACCCACCCGGGATTGAGTGTCTGGGCAGGGGCCACC
CTCGGCCATGGGCTGATGGTGGGGTTGGCGGTGGTGGGCGGTCGCTTCTTAGCAGCCCACATCTCTGAACGGGCCGTGCA
TTGGGTGGGGGGCGGCTTGTTTCTGCTGTTTGCGTTGGTAACCAGTTGGGAATTGTTAGGATAA

Upstream 100 bases:

>100_bases
GTTCACGCGGAGGTGAGCTTGGTGAGTCCGTCTGACTTTCCCAGCCTTCGCCTCCAGGTGTGAACCGATTCCACACACAA
GAGAGGTTGGAGGCTAAACG

Downstream 100 bases:

>100_bases
ACAACTGTAGTTATTTCAAAGAGCAATGAAACAGCTCGTTGCGTCAGTGGAGCCGAGCACTGGAGGAGCGTCTTAATCGG
GTTTGAAACAACCATACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAAMTLLAVVAGKVLFELLPPLGVRVLSAGVFAAFG
LRMLWQAYQMTPQQEKEEEEEALRLVEQAEAKGAGRGGAWAVVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGAT
LGHGLMVGLAVVGGRFLAAHISERAVHWVGGGLFLLFALVTSWELLG

Sequences:

>Translated_207_residues
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAAMTLLAVVAGKVLFELLPPLGVRVLSAGVFAAFG
LRMLWQAYQMTPQQEKEEEEEALRLVEQAEAKGAGRGGAWAVVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGAT
LGHGLMVGLAVVGGRFLAAHISERAVHWVGGGLFLLFALVTSWELLG
>Mature_207_residues
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAAMTLLAVVAGKVLFELLPPLGVRVLSAGVFAAFG
LRMLWQAYQMTPQQEKEEEEEALRLVEQAEAKGAGRGGAWAVVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGAT
LGHGLMVGLAVVGGRFLAAHISERAVHWVGGGLFLLFALVTSWELLG

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

Organism=Homo sapiens, GI32189371, Length=218, Percent_Identity=36.2385321100917, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17556152, Length=219, Percent_Identity=39.2694063926941, Blast_Score=129, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI17556150, Length=168, Percent_Identity=36.9047619047619, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281361794, Length=217, Percent_Identity=39.1705069124424, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24647003, Length=217, Percent_Identity=39.1705069124424, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21357589, Length=217, Percent_Identity=39.1705069124424, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI281361792, Length=159, Percent_Identity=33.9622641509434, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281361790, Length=159, Percent_Identity=33.9622641509434, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281361796, Length=101, Percent_Identity=41.5841584158416, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 22232; Mature: 22232

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAAMTLLAVVAGKVLF
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
ELLPPLGVRVLSAGVFAAFGLRMLWQAYQMTPQQEKEEEEEALRLVEQAEAKGAGRGGAW
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
AVVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGATLGHGLMVGLAVVGGRFLAAH
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISERAVHWVGGGLFLLFALVTSWELLG
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAAMTLLAVVAGKVLF
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
ELLPPLGVRVLSAGVFAAFGLRMLWQAYQMTPQQEKEEEEEALRLVEQAEAKGAGRGGAW
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
AVVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGATLGHGLMVGLAVVGGRFLAAH
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISERAVHWVGGGLFLLFALVTSWELLG
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]