| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yqeL [H]
Identifier: 86605296
GI number: 86605296
Start: 591848
End: 592186
Strand: Reverse
Name: yqeL [H]
Synonym: CYA_0580
Alternate gene names: 86605296
Gene position: 592186-591848 (Counterclockwise)
Preceding gene: 86605297
Following gene: 86605295
Centisome position: 20.19
GC content: 52.21
Gene sequence:
>339_bases ATGGCGTTGAGCGCAGCTCGCGCAGCAGAAGAAAAAAAAGGCGGCGACATTGTCCTGCTGGATGTATCCCAAATTTCCAC GTTGGCGGATTACTTCCTTTTGATCAGTGGCTACTCGCTTACGCAAGTACGGGCCATTGCCCGAGCAATCGAGGAAAAGG TTTGGGAGGAGTGGCAACAGAGTCCGCGCCGCATCGAAGGTCAAGAGTCAGGCTCTTGGATACTGATCGACTATGCCGAT CTCATCGTCCATGTGTTCATGCAGGAGGAAAGAGACTATTACGACCTGGAATCTTTCTGGATCCAGGCTCAGCGAGTCGA TTTGCCAATAGCAGGCTAG
Upstream 100 bases:
>100_bases AGGTTCGGAGGAGATTGTGTCTCCAGTCAATTCAGTCGTTTCAGGAGGGTTTTAGTTGCTACAGTCCATGCCTGTCCGTG CCAGGGATCCCATCTATCGC
Downstream 100 bases:
>100_bases ACATAGTTTTAGATCCTTAGATCTTGGCAGCTTTTCAGAGCTTGTAGCCAGGCGAAGAGTTGCTCCGCTTAGCTCTTCAA GTGGGTGTCTTTGCCAAACG
Product: iojap protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MALSAARAAEEKKGGDIVLLDVSQISTLADYFLLISGYSLTQVRAIARAIEEKVWEEWQQSPRRIEGQESGSWILIDYAD LIVHVFMQEERDYYDLESFWIQAQRVDLPIAG
Sequences:
>Translated_112_residues MALSAARAAEEKKGGDIVLLDVSQISTLADYFLLISGYSLTQVRAIARAIEEKVWEEWQQSPRRIEGQESGSWILIDYAD LIVHVFMQEERDYYDLESFWIQAQRVDLPIAG >Mature_111_residues ALSAARAAEEKKGGDIVLLDVSQISTLADYFLLISGYSLTQVRAIARAIEEKVWEEWQQSPRRIEGQESGSWILIDYADL IVHVFMQEERDYYDLESFWIQAQRVDLPIAG
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=94, Percent_Identity=36.1702127659575, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 12823; Mature: 12691
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSAARAAEEKKGGDIVLLDVSQISTLADYFLLISGYSLTQVRAIARAIEEKVWEEWQQ CCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SPRRIEGQESGSWILIDYADLIVHVFMQEERDYYDLESFWIQAQRVDLPIAG CCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALSAARAAEEKKGGDIVLLDVSQISTLADYFLLISGYSLTQVRAIARAIEEKVWEEWQQ CCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SPRRIEGQESGSWILIDYADLIVHVFMQEERDYYDLESFWIQAQRVDLPIAG CCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]